Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RNA5SP375-201ENST00000362975 119 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RNA5SP427-201ENST00000365323 119 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RNU1-84P-201ENST00000365447 164 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 OOSP1-201ENST00000398992 1270 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC024937.2-201ENST00000411669 1242 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RPL18AP14-201ENST00000417685 526 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 YWHAZP5-201ENST00000419975 730 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 CRIP1P1-201ENST00000427567 185 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL121578.1-201ENST00000428051 892 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 PSMD8P1-201ENST00000436275 769 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL079303.1-201ENST00000486611 463 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RPL5P3-201ENST00000493817 889 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL104P-201ENST00000498686 293 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC078899.1-201ENST00000521432 1185 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AP001858.2-201ENST00000536213 601 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL390334.1-201ENST00000556395 450 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL426P-201ENST00000579106 295 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL589743.6-201ENST00000611025 117 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AC009283.1-201ENST00000615852 645 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL138693.1-201ENST00000622219 129 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 KDM5DP1-201ENST00000622542 298 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 AL138820.1-201ENST00000617901 5305 ntBASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KCNIP3Q9Y2W7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC002525.1-201ENST00000624392 1622 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL513548.1-201ENST00000562904 1724 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC007068.1-201ENST00000396690 844 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC226101.1-201ENST00000401483 387 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 RNU2-5P-201ENST00000410533 180 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SKP121-201ENST00000410842 305 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 MICG-208ENST00000416822 132 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 GRPEL2P2-201ENST00000421856 670 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL645939.3-201ENST00000435408 225 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 BTG3P1-201ENST00000435859 716 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 POU5F1P5-201ENST00000445059 658 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 PCMTD1P3-201ENST00000451824 472 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 SEPT7P3-201ENST00000455017 621 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AP002371.1-201ENST00000463604 433 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms