Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC117409.1-201ENST00000470499 1310 ntBASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 CIR1P2-201ENST00000514821 1342 ntBASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
NPC1L1Q9UHC9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AC092070.2-203ENST00000598377 3644 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AL159987.1-201ENST00000347911 293 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 RNA5SP30-201ENST00000365552 115 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 MIR130A-201ENST00000385274 89 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AC074386.1-201ENST00000476560 767 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 RN7SL177P-201ENST00000476596 299 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 PDCL3P4-201ENST00000489621 720 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AC022826.1-201ENST00000519383 805 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AC015802.2-201ENST00000589690 189 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 AP004289.1-201ENST00000436307 2205 ntBASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
NPC1L1Q9UHC9 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC087752.1-201ENST00000391360 558 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 OR2W4P-201ENST00000406496 926 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 OR5W1P-201ENST00000423705 938 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC126120.1-201ENST00000431082 470 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 SUMO2P3-201ENST00000438311 288 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 BX679664.2-201ENST00000439282 283 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 OR7E116P-201ENST00000448529 957 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC083899.1-201ENST00000454465 3819 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 RPL5P12-201ENST00000477071 851 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC079080.1-201ENST00000479841 822 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 PSMA2P2-201ENST00000504319 686 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 SNORD46.2-201ENST00000516021 102 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 OR4A6P-201ENST00000534364 970 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC079600.1-201ENST00000550326 297 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 NPM1P45-201ENST00000583151 559 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 RPS2P45-201ENST00000469997 2057 ntBASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPC1L1Q9UHC9 AC015689.2-201ENST00000528172 1738 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 RNA5SP91-201ENST00000390902 119 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 BMS1P17-202ENST00000416720 316 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 HSPE1P2-201ENST00000554777 306 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC010547.6-201ENST00000571789 193 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 MIR4260-201ENST00000583107 67 ntBASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NPC1L1Q9UHC9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms