Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL158068.1-201ENST00000506116 616 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC010343.2-201ENST00000510162 224 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 RNU6-1102P-201ENST00000516149 96 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 IGLVIV-64-201ENST00000518581 301 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC015818.6-201ENST00000584274 634 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL512652.1-201ENST00000619006 500 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL132640.3-201ENST00000630473 177 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL132656.3-201ENST00000606384 1595 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AP000866.6-201ENST00000638898 3579 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC018717.1-201ENST00000457712 1505 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VTA1Q9NP79 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VTA1Q9NP79 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC093909.5-201ENST00000621839 1799 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VTA1Q9NP79 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VTA1Q9NP79 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 SUGT1P2-201ENST00000379452 992 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 SLC20A1P1-201ENST00000413906 956 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 RPS3P2-201ENST00000421346 701 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 OR3D1P-201ENST00000438288 955 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AL353662.1-201ENST00000439099 327 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 BUD31P2-201ENST00000449374 300 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC002553.3-201ENST00000453002 341 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC093801.2-201ENST00000503966 1050 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC090958.1-201ENST00000511122 351 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC092868.3-201ENST00000560515 784 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC073333.2-201ENST00000603589 769 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC004775.1-201ENST00000607389 753 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AL445647.2-201ENST00000615170 130 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC068880.4-201ENST00000623082 495 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC129915.3-201ENST00000634128 948 ntBASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.11□□□□□ -1.27
VTA1Q9NP79 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AP000641.1-201ENST00000531988 1639 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL133243.2-201ENST00000610331 1621 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 SNORA21-201ENST00000362423 132 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 RN7SKP78-201ENST00000364711 318 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
VTA1Q9NP79 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AL050335.1-201ENST00000396909 869 ntBASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.1□□□□□ -1.27
VTA1Q9NP79 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms