Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AL591222.2-201ENST00000604443 754 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AL589743.6-201ENST00000611025 117 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AL355974.3-201ENST00000617383 467 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 SNX18P12-201ENST00000624821 759 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 TCP1P3-201ENST00000414406 1498 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 AP001157.1-201ENST00000550837 2339 ntBASIC5.36□□□□□ -1.55
HMG20AQ9NP66 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HMG20AQ9NP66 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 MIR1266-201ENST00000408125 84 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 RN7SKP166-201ENST00000410812 305 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 PTCD2P2-201ENST00000415579 1095 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 NPM1P23-201ENST00000440193 849 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC234771.4-201ENST00000441416 730 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC078899.1-201ENST00000521432 1185 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC009729.1-201ENST00000548873 1133 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 COX6CP7-201ENST00000597056 208 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC036176.3-201ENST00000602456 418 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC007938.2-201ENST00000604666 2634 ntBASIC5.35□□□□□ -1.55
HMG20AQ9NP66 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.35□□□□□ -1.55
HMG20AQ9NP66 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 THAP12P9-201ENST00000503971 2360 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 HYALP1-201ENST00000417674 1279 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC009784.1-201ENST00000426484 460 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 CRIP1P1-201ENST00000427567 185 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC063955.1-201ENST00000462872 685 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 RPS7P11-201ENST00000484240 586 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 RN7SL714P-201ENST00000487050 298 ntBASIC5.34□□□□□ -1.55
HMG20AQ9NP66 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMG20AQ9NP66 AC122714.1-201ENST00000502510 459 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms