Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC005042.1-201ENST00000393397 800 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 HMGB1P20-201ENST00000402555 677 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC007562.1-201ENST00000421819 517 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC023274.2-201ENST00000445264 521 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 UBA52P7-201ENST00000486088 380 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AP000641.1-201ENST00000531988 1639 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AL355377.1-201ENST00000621125 1653 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 MAPK10-304ENST00000641341 3984 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC140479.2-201ENST00000421567 3130 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC005005.4-201ENST00000623789 16698 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC022164.1-201ENST00000568767 2673 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 SNORD1C-201ENST00000363315 78 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 RPS4XP5-201ENST00000419038 768 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC079355.1-201ENST00000421770 223 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 DNAJC19P5-201ENST00000443295 316 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 RPSAP39-201ENST00000467439 883 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AL352984.2-201ENST00000611153 546 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 LINC01963-201ENST00000562038 3148 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 SNX18P3-202ENST00000565670 1750 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 RBPJP7-201ENST00000442803 1447 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 RBPJP5-201ENST00000449433 1447 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 AC007842.1-201ENST00000597336 2039 ntBASIC5.26□□□□□ -1.57
KIAA1549Q9HCM3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 OR10R3P-201ENST00000361688 942 ntBASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC016739.1-201ENST00000405359 345 ntBASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC093155.2-201ENST00000420734 937 ntBASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 RPL12P16-201ENST00000431098 498 ntBASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC006335.2-201ENST00000437993 330 ntBASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.25□□□□□ -1.57
KIAA1549Q9HCM3 MIR4489-201ENST00000578869 62 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms