Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC051619.2-201ENST00000559063 397 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 NPM1P42-201ENST00000560329 862 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 MIR3614-201ENST00000581261 86 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC124916.2-201ENST00000604416 224 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC108865.2-201ENST00000606881 432 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 MIR6768-201ENST00000610734 72 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC015799.1-201ENST00000622996 3122 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 RBMY1HP-201ENST00000382759 1389 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 AC130304.1-201ENST00000622942 2385 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 MYL6P5-201ENST00000412707 459 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 AC073410.1-201ENST00000435125 589 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 AC010240.2-201ENST00000445363 1205 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 RN7SL174P-201ENST00000475578 289 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 RPL38P3-201ENST00000484463 213 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 RPS4XP14-201ENST00000493072 781 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 OR56A7P-201ENST00000524865 941 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 TTC41P-205ENST00000551270 3963 ntBASIC7.1□□□□□ -1.27
UPF3BQ9BZI7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 SNRPEP6-201ENST00000407465 277 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 RPL7AP14-201ENST00000424041 802 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC130360.1-201ENST00000425489 1117 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AL590399.2-201ENST00000427536 309 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 RPS12P17-201ENST00000438591 377 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AL359839.1-201ENST00000451975 1160 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 PPIAP7-201ENST00000454070 489 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC104164.1-201ENST00000460282 590 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 RN7SL177P-201ENST00000476596 299 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AP002453.1-201ENST00000492327 668 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC130365.2-201ENST00000525882 1201 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AP000620.1-201ENST00000527147 504 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AL355974.3-201ENST00000617383 467 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 AC021422.1-201ENST00000621212 473 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 PSG10P-201ENST00000501199 1500 ntBASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF3BQ9BZI7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
UPF3BQ9BZI7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.09□□□□□ -1.28
UPF3BQ9BZI7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
UPF3BQ9BZI7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 KYNUP3-201ENST00000574386 1341 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 THAP12P9-201ENST00000503971 2360 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms