Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OR7E99P-201ENST00000505750 922 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 AC091874.2-201ENST00000505889 720 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKP4Q99569 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.95□□□□□ -1.46
PKP4Q99569 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.95□□□□□ -1.46
PKP4Q99569 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 AC008126.1-201ENST00000549019 480 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKP4Q99569 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.95□□□□□ -1.46
PKP4Q99569 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.95□□□□□ -1.46
PKP4Q99569 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.95□□□□□ -1.46
PKP4Q99569 GLYATL1P2-202ENST00000588046 902 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 AC010615.3-201ENST00000597319 394 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 LSM1P2-201ENST00000604911 322 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 OR8A1-204ENST00000642111 1145 ntBASIC5.95□□□□□ -1.46
PKP4Q99569 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PKP4Q99569 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PKP4Q99569 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PKP4Q99569 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
PKP4Q99569 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKP4Q99569 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.95□□□□□ -1.46
PKP4Q99569 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.95□□□□□ -1.46
PKP4Q99569 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.95□□□□□ -1.46
PKP4Q99569 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC005261.6-201ENST00000623072 1387 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PKP4Q99569 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 CAP1P2-201ENST00000417455 1409 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.94□□□□□ -1.46
PKP4Q99569 MIR1275-201ENST00000408770 80 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 RNA5SP251-201ENST00000410614 137 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AL096829.1-201ENST00000413677 457 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 RPL35AP31-201ENST00000418340 337 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC013470.3-201ENST00000420252 1194 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AL034379.1-201ENST00000423216 253 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 UBE2V2P1-201ENST00000434717 398 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 CLNS1AP1-201ENST00000435954 682 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC023141.3-201ENST00000436698 278 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 MTND6P5-201ENST00000448266 512 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC002553.3-201ENST00000453002 341 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 RAB28P2-201ENST00000454299 641 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC104339.1-201ENST00000465478 348 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 RN7SL352P-201ENST00000466002 277 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 DEFB109A-201ENST00000482450 265 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC021006.1-201ENST00000489849 553 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.94□□□□□ -1.46
PKP4Q99569 CR383658.1-201ENST00000514609 734 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 TPM3P3-201ENST00000521343 354 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.94□□□□□ -1.46
PKP4Q99569 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.94□□□□□ -1.46
PKP4Q99569 MIR3154-201ENST00000577829 84 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC144521.1-201ENST00000607148 956 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AL359091.2-201ENST00000609303 556 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.94□□□□□ -1.46
PKP4Q99569 MIR6780B-201ENST00000610307 79 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AL136097.3-201ENST00000611097 505 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AL512652.1-201ENST00000619006 500 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 AF117829.2-201ENST00000619538 361 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 PROS2P-201ENST00000474651 1951 ntBASIC5.94□□□□□ -1.46
PKP4Q99569 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.94□□□□□ -1.46
PKP4Q99569 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PKP4Q99569 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.94□□□□□ -1.46
PKP4Q99569 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PKP4Q99569 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.93□□□□□ -1.46
PKP4Q99569 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.93□□□□□ -1.46
PKP4Q99569 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PKP4Q99569 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PKP4Q99569 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PKP4Q99569 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PKP4Q99569 AC068769.1-201ENST00000474767 2426 ntBASIC5.93□□□□□ -1.46
PKP4Q99569 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PKP4Q99569 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms