Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC016908.1-201ENST00000442571 1219 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC023274.2-201ENST00000445264 521 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC009963.4-201ENST00000448535 339 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 BUD31P2-201ENST00000449374 300 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC093663.2-201ENST00000484625 313 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 OR9N1P-202ENST00000494289 481 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC010468.3-201ENST00000508225 458 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.91□□□□□ -1.3
HPS3Q969F9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 FABP5P6-201ENST00000510588 409 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC093816.1-201ENST00000515076 913 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 OR5D2P-201ENST00000524390 911 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AP003102.1-201ENST00000525638 661 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AP001858.2-201ENST00000536213 601 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC092868.3-201ENST00000560515 784 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC005632.2-201ENST00000564271 828 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AP001496.3-201ENST00000580230 913 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 NPIPB1P-202ENST00000588786 828 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 BNIP3P31-201ENST00000604515 566 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 RPSAP75-201ENST00000605848 301 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AL391834.1-201ENST00000609609 560 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AC012676.3-201ENST00000614983 479 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AP006248.3-201ENST00000623580 594 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.91□□□□□ -1.3
HPS3Q969F9 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC009501.3-201ENST00000605001 1352 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC024587.1-201ENST00000505925 2157 ntBASIC6.91□□□□□ -1.3
HPS3Q969F9 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.91□□□□□ -1.3
HPS3Q969F9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.91□□□□□ -1.3
HPS3Q969F9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS3Q969F9 HSPD1P8-201ENST00000400121 1658 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
HPS3Q969F9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HPS3Q969F9 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HPS3Q969F9 SNORA43.1-201ENST00000364863 140 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HPS3Q969F9 PRELID1P1-201ENST00000403549 660 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AL355143.1-201ENST00000407101 841 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.9□□□□□ -1.3
HPS3Q969F9 VN1R20P-201ENST00000425215 966 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 MTND2P21-201ENST00000436242 1042 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS3Q969F9 MORF4-201ENST00000447135 971 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 RPS18P1-201ENST00000447840 458 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC097359.1-201ENST00000447946 463 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 CABYRP1-201ENST00000465493 1045 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC092905.1-201ENST00000467527 949 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 H3F3AP5-201ENST00000475267 429 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 RPL29P23-201ENST00000486188 442 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AL117692.1-201ENST00000494283 713 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC138409.2-202ENST00000507274 458 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC010343.2-201ENST00000510162 224 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS3Q969F9 Y_RNA.710-201ENST00000516975 110 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC113192.3-201ENST00000529152 742 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC090115.2-201ENST00000548060 883 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS3Q969F9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AC011458.1-201ENST00000604034 617 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC135178.6-201ENST00000605314 398 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 AC018645.2-201ENST00000609151 472 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.9□□□□□ -1.3
HPS3Q969F9 AL596275.2-207ENST00000641188 675 ntBASIC6.9□□□□□ -1.3
HPS3Q969F9 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HPS3Q969F9 CAP1P2-201ENST00000417455 1409 ntBASIC6.9□□□□□ -1.31
HPS3Q969F9 Z83820.1-201ENST00000456978 1499 ntBASIC6.9□□□□□ -1.31
HPS3Q969F9 AC120036.2-201ENST00000509729 1474 ntBASIC6.9□□□□□ -1.31
HPS3Q969F9 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HPS3Q969F9 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
HPS3Q969F9 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
HPS3Q969F9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
HPS3Q969F9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HPS3Q969F9 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms