Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC015977.1-201ENST00000418887 292 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AL645939.3-201ENST00000435408 225 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 PSMD8P1-201ENST00000436275 769 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 LYARP1-201ENST00000436977 1501 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 MORF4-201ENST00000447135 971 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC007386.1-201ENST00000455212 582 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC073594.1-201ENST00000462065 364 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 RNA5SP400-201ENST00000517155 111 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC109635.6-201ENST00000525487 1113 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 HMGN1P26-201ENST00000558737 303 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 TXNP4-201ENST00000575018 310 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC024267.2-201ENST00000582737 417 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 SYPL1P2-201ENST00000582878 727 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC007620.3-201ENST00000608131 497 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 RBPJP2-201ENST00000618187 1444 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC007342.9-201ENST00000623877 1385 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 AC068213.1-201ENST00000625124 226 ntBASIC5.61□□□□□ -1.51
PTP4A1Q93096 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTP4A1Q93096 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTP4A1Q93096 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 RNU6-1251P-201ENST00000364502 107 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 RFESDP1-201ENST00000422350 461 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC113412.1-201ENST00000425840 504 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 NPM1P26-201ENST00000426339 738 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 ARL5AP3-201ENST00000439327 386 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC104629.2-201ENST00000468627 598 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 RN7SL413P-201ENST00000482700 297 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC022784.5-201ENST00000522241 437 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 OR6M2P-201ENST00000529831 871 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 RPA2P3-201ENST00000533268 770 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 RPL3P13-201ENST00000550415 216 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 MIR4732-201ENST00000581873 76 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AL390877.1-201ENST00000605704 214 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 RMST_5.1-201ENST00000618704 126 ntBASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTP4A1Q93096 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.6□□□□□ -1.51
PTP4A1Q93096 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms