Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RPL21P50-201ENST00000417698 477 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 GTF2IP14-201ENST00000441415 586 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AL512593.1-201ENST00000444758 779 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 TIMM8BP2-201ENST00000445940 251 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 RARRES2P3-201ENST00000457739 473 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 RPL12P31-201ENST00000478433 450 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 OR7E157P-201ENST00000494376 911 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 OR7E99P-201ENST00000505750 922 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 OR4D12P-201ENST00000509361 911 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AC090424.1-201ENST00000535243 736 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AL121594.2-201ENST00000541658 472 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AC121758.1-202ENST00000556917 658 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AC037479.1-201ENST00000558361 625 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 GAPDHP41-201ENST00000613707 975 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC112Q8NEF3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 BX284613.1-201ENST00000452221 1641 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC005005.4-201ENST00000623789 16698 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 MAPK10-338ENST00000641647 3362 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 RN7SKP185-201ENST00000362813 326 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 RNU6-316P-201ENST00000391027 107 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC087752.1-201ENST00000391360 558 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC079809.1-201ENST00000415468 276 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 THEM7P-201ENST00000419556 672 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 RPL7AP51-201ENST00000422016 760 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC234771.2-201ENST00000445718 597 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 RPL12P39-201ENST00000455456 496 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC112Q8NEF3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 FANCD2P2-201ENST00000437591 1400 ntBASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 RNA5SP375-201ENST00000362975 119 ntBASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 RPS15AP30-201ENST00000420976 390 ntBASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 AC002127.1-201ENST00000421305 225 ntBASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 GPN3P1-201ENST00000423883 535 ntBASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC112Q8NEF3 CRIP1P1-201ENST00000427567 185 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 795.5 ms