Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RN7SKP104-201ENST00000362605 328 ntBASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 PRUNEP1-201ENST00000425846 705 ntBASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 AC068522.1-201ENST00000482895 345 ntBASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 RN7SL570P-201ENST00000484405 292 ntBASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 AP002799.1-201ENST00000623552 423 ntBASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 HSPA8P18-201ENST00000439846 1928 ntBASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SNAPC4Q5SXM2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC006466.1-201ENST00000438721 289 ntBASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC004129.2-201ENST00000457229 287 ntBASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC009163.6-201ENST00000612367 342 ntBASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 AC018765.1-201ENST00000623357 3446 ntBASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SNAPC4Q5SXM2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 AC013442.1-201ENST00000397347 228 ntBASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 RBMY2QP-201ENST00000429799 1147 ntBASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 RPS29P33-201ENST00000456717 146 ntBASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 AC024451.1-201ENST00000508013 779 ntBASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 IMMTP1-201ENST00000435590 2219 ntBASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SNAPC4Q5SXM2 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AL133325.1-201ENST00000421090 382 ntBASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 RPS3AP41-201ENST00000462701 778 ntBASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AC109462.1-201ENST00000491087 368 ntBASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AC106730.2-201ENST00000566641 540 ntBASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 TCL6_3.1-201ENST00000619064 137 ntBASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
SNAPC4Q5SXM2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AL360271.1-201ENST00000395679 510 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 DUTP5-201ENST00000406790 469 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC015977.1-201ENST00000418887 292 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC091390.1-201ENST00000433904 331 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC023141.8-201ENST00000442554 208 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC013701.1-201ENST00000522657 465 ntBASIC9.4□□□□□ -0.91
SNAPC4Q5SXM2 AC244502.2-201ENST00000543361 851 ntBASIC9.4□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms