Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AL121594.2-201ENST00000541658 472 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 SETP1-201ENST00000556014 845 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AC100832.2-201ENST00000582080 776 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 SNX18P12-201ENST00000624821 759 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 AC239868.2-201ENST00000564237 4527 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 THAP12P5-201ENST00000405864 2275 ntBASIC5.32□□□□□ -1.56
CCDC58Q4VC31 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC58Q4VC31 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC004023.1-201ENST00000561473 1744 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 RNA5SP346-201ENST00000363541 121 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 MRPL32P1-201ENST00000406301 247 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 RN7SKP279-201ENST00000411383 298 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 GPN3P1-201ENST00000423883 535 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC138761.5-201ENST00000433967 325 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AL512593.1-201ENST00000444758 779 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 CYCSP25-201ENST00000525280 316 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC089984.3-201ENST00000552838 363 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC090826.1-203ENST00000569235 490 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC008507.3-201ENST00000585753 472 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AL139407.1-201ENST00000613826 1175 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 MIR6811-201ENST00000620409 58 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.31□□□□□ -1.56
CCDC58Q4VC31 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC58Q4VC31 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 RNA5SP375-201ENST00000362975 119 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AL139100.1-201ENST00000408001 498 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 RN7SKP205-201ENST00000410999 307 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 RNA5SP155-201ENST00000411154 129 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 ELOBP4-201ENST00000423418 296 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 OR3D1P-201ENST00000438288 955 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 BMS1P11-201ENST00000442351 885 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 OR2L9P-201ENST00000444456 913 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC58Q4VC31 FRG2FP-204ENST00000453982 852 ntBASIC5.3□□□□□ -1.56
CCDC58Q4VC31 BMS1P9-201ENST00000457640 885 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms