Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNB3Q05901 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 RN7SKP86-201ENST00000410454 332 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AL158827.1-201ENST00000416300 391 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC009506.2-201ENST00000420635 840 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AL354766.1-201ENST00000423396 542 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 OR5W1P-201ENST00000423705 938 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 EMC3-AS1-205ENST00000438698 534 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 PCNPP2-201ENST00000441651 455 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC073072.2-201ENST00000447425 348 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 REG1CP-206ENST00000447469 496 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC097359.1-201ENST00000447946 463 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 CR383656.1-201ENST00000484916 377 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 RNA5SP418-201ENST00000515951 117 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 SNORA74.1-201ENST00000516320 180 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 ZNF322P1-201ENST00000568013 1209 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 WBP1LP12-201ENST00000604449 331 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 AC008555.7-201ENST00000605008 583 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 AL109924.4-201ENST00000623089 670 ntBASIC5.65□□□□□ -1.5
CHRNB3Q05901 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.65□□□□□ -1.5
CHRNB3Q05901 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.65□□□□□ -1.51
CHRNB3Q05901 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNB3Q05901 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNB3Q05901 AC012078.1-201ENST00000405035 1646 ntBASIC5.65□□□□□ -1.51
CHRNB3Q05901 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNB3Q05901 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHRNB3Q05901 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CHRNB3Q05901 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CHRNB3Q05901 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CHRNB3Q05901 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 LINC01613-201ENST00000561476 2780 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 RNA5SP232-201ENST00000364144 119 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 YWHAZP4-201ENST00000392459 708 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 RPL11P3-201ENST00000395256 523 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 AC002069.1-201ENST00000429649 1159 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 GAPDHP75-201ENST00000433910 943 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 SOCS5P1-201ENST00000440415 949 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 AC114982.2-201ENST00000461396 358 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 SNRPCP3-201ENST00000474888 476 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 RPS26P24-201ENST00000497656 331 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 GLUD1P3-202ENST00000508551 200 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 CYCSP25-201ENST00000525280 316 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 AC135983.3-201ENST00000528049 1226 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 AC090826.1-203ENST00000569235 490 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 AL163952.1-202ENST00000569625 600 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 AL591167.1-201ENST00000607321 456 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 AL133481.2-203ENST00000607558 139 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 AL355974.3-201ENST00000617383 467 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
CHRNB3Q05901 AL137058.3-201ENST00000624531 3099 ntBASIC5.64□□□□□ -1.51
CHRNB3Q05901 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHRNB3Q05901 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms