Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.58□□□□□ -1.36
VCPP55072 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.58□□□□□ -1.36
VCPP55072 NME1P1-201ENST00000420914 382 ntBASIC6.58□□□□□ -1.36
VCPP55072 AL627308.1-201ENST00000435693 821 ntBASIC6.58□□□□□ -1.36
VCPP55072 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
VCPP55072 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.58□□□□□ -1.36
VCPP55072 AL133351.3-201ENST00000454998 193 ntBASIC6.58□□□□□ -1.36
VCPP55072 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.58□□□□□ -1.36
VCPP55072 AP001804.1-201ENST00000526868 919 ntBASIC6.58□□□□□ -1.36
VCPP55072 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 AF117829.2-201ENST00000619538 361 ntBASIC6.58□□□□□ -1.36
VCPP55072 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.58□□□□□ -1.36
VCPP55072 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.58□□□□□ -1.36
VCPP55072 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VCPP55072 AC005225.5-201ENST00000623547 2225 ntBASIC6.58□□□□□ -1.36
VCPP55072 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.58□□□□□ -1.36
VCPP55072 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.58□□□□□ -1.36
VCPP55072 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VCPP55072 AOX3P-204ENST00000491025 2107 ntBASIC6.58□□□□□ -1.36
VCPP55072 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.58□□□□□ -1.36
VCPP55072 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
VCPP55072 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VCPP55072 AC064862.4-201ENST00000442180 334 ntBASIC6.57□□□□□ -1.36
VCPP55072 YWHAEP1-201ENST00000453697 763 ntBASIC6.57□□□□□ -1.36
VCPP55072 RN7SL714P-201ENST00000487050 298 ntBASIC6.57□□□□□ -1.36
VCPP55072 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.57□□□□□ -1.36
VCPP55072 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.57□□□□□ -1.36
VCPP55072 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.57□□□□□ -1.36
VCPP55072 RN7SKP248-201ENST00000516278 305 ntBASIC6.57□□□□□ -1.36
VCPP55072 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.57□□□□□ -1.36
VCPP55072 TMEM97P2-201ENST00000517841 403 ntBASIC6.57□□□□□ -1.36
VCPP55072 AP003080.1-202ENST00000526526 915 ntBASIC6.57□□□□□ -1.36
VCPP55072 MIR3189-201ENST00000578735 73 ntBASIC6.57□□□□□ -1.36
VCPP55072 SNORA74.4-201ENST00000607595 199 ntBASIC6.57□□□□□ -1.36
VCPP55072 AL352984.2-202ENST00000613699 155 ntBASIC6.57□□□□□ -1.36
VCPP55072 AC021422.1-201ENST00000621212 473 ntBASIC6.57□□□□□ -1.36
VCPP55072 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.57□□□□□ -1.36
VCPP55072 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VCPP55072 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
VCPP55072 AL136984.1-201ENST00000607611 1893 ntBASIC6.57□□□□□ -1.36
VCPP55072 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VCPP55072 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
VCPP55072 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VCPP55072 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VCPP55072 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.57□□□□□ -1.36
VCPP55072 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
VCPP55072 GUCY1B2-204ENST00000531898 1979 ntBASIC6.57□□□□□ -1.36
VCPP55072 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.57□□□□□ -1.36
VCPP55072 USP9YP3-201ENST00000434481 1766 ntBASIC6.57□□□□□ -1.36
VCPP55072 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.56□□□□□ -1.36
VCPP55072 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 NCOA4P2-201ENST00000340589 1813 ntBASIC6.56□□□□□ -1.36
VCPP55072 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 GAPDHP58-201ENST00000438477 1006 ntBASIC6.56□□□□□ -1.36
VCPP55072 RPS27AP3-201ENST00000453803 454 ntBASIC6.56□□□□□ -1.36
VCPP55072 RPS27AP2-201ENST00000457576 465 ntBASIC6.56□□□□□ -1.36
VCPP55072 AL022319.1-201ENST00000458183 1167 ntBASIC6.56□□□□□ -1.36
VCPP55072 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.56□□□□□ -1.36
VCPP55072 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 AC093270.2-201ENST00000486157 792 ntBASIC6.56□□□□□ -1.36
VCPP55072 EIF3LP3-201ENST00000495197 822 ntBASIC6.56□□□□□ -1.36
VCPP55072 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.56□□□□□ -1.36
VCPP55072 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.56□□□□□ -1.36
VCPP55072 AC044860.2-201ENST00000561005 179 ntBASIC6.56□□□□□ -1.36
VCPP55072 OOSP1P2-201ENST00000579644 351 ntBASIC6.56□□□□□ -1.36
VCPP55072 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VCPP55072 AL021368.3-201ENST00000607119 578 ntBASIC6.56□□□□□ -1.36
VCPP55072 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.56□□□□□ -1.36
VCPP55072 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 AC125238.2-201ENST00000430003 1440 ntBASIC6.56□□□□□ -1.36
VCPP55072 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
VCPP55072 IMMTP1-201ENST00000435590 2219 ntBASIC6.56□□□□□ -1.36
VCPP55072 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.56□□□□□ -1.36
VCPP55072 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VCPP55072 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VCPP55072 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms