Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC233289.1-201ENST00000403700 508 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 RN7SKP199-201ENST00000410325 305 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 RNU2-18P-201ENST00000411224 162 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.71□□□□□ -1.5
GTF2A1P52655 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC019205.1-201ENST00000421830 730 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF2A1P52655 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
GTF2A1P52655 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF2A1P52655 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.71□□□□□ -1.5
GTF2A1P52655 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC078899.1-201ENST00000521432 1185 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC069240.2-201ENST00000550242 609 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF2A1P52655 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF2A1P52655 ANP32BP1-202ENST00000568553 737 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 AC020916.2-201ENST00000591242 360 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC061999.1-201ENST00000624454 177 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.71□□□□□ -1.5
GTF2A1P52655 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
GTF2A1P52655 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GTF2A1P52655 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF2A1P52655 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF2A1P52655 LINC01109-201ENST00000603837 3081 ntBASIC5.71□□□□□ -1.5
GTF2A1P52655 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.71□□□□□ -1.5
GTF2A1P52655 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 AP001273.1-201ENST00000624493 3152 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.7□□□□□ -1.5
GTF2A1P52655 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 UBBP1-201ENST00000392399 473 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AL359633.1-201ENST00000421403 310 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AC003989.1-201ENST00000434569 565 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.7□□□□□ -1.5
GTF2A1P52655 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC073594.1-201ENST00000462065 364 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 RN7SL91P-201ENST00000469313 291 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 NIP7P2-201ENST00000485801 544 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC022206.1-201ENST00000495947 347 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 ARL4AP1-201ENST00000503220 705 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AC010442.1-201ENST00000515583 816 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AC008429.2-201ENST00000523057 864 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
GTF2A1P52655 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC087283.1-201ENST00000604029 1074 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AC025574.2-201ENST00000615621 514 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 KDM5DP1-201ENST00000622542 298 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC073488.6-201ENST00000632293 754 ntBASIC5.7□□□□□ -1.5
GTF2A1P52655 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.7□□□□□ -1.5
GTF2A1P52655 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
GTF2A1P52655 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
GTF2A1P52655 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GTF2A1P52655 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 MTCO1P15-201ENST00000529569 1526 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF2A1P52655 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 RN7SKP189-201ENST00000365042 330 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms