Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.35□□□□□ -1.39
CTNNA1P35221 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CTNNA1P35221 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CTNNA1P35221 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CTNNA1P35221 RNU105B-201ENST00000364478 208 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.35□□□□□ -1.39
CTNNA1P35221 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.35□□□□□ -1.39
CTNNA1P35221 AC013403.1-201ENST00000436954 263 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 CUBNP2-201ENST00000443534 1139 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 RN7SL393P-201ENST00000463588 296 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
CTNNA1P35221 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.35□□□□□ -1.39
CTNNA1P35221 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.35□□□□□ -1.39
CTNNA1P35221 RN7SL284P-201ENST00000498823 275 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 CCDC11P1-201ENST00000503137 1162 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.35□□□□□ -1.39
CTNNA1P35221 ST13P12-201ENST00000508958 1094 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.35□□□□□ -1.39
CTNNA1P35221 RN7SKP34-201ENST00000516142 244 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 NPM1P52-201ENST00000518264 846 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 AC025857.1-201ENST00000525252 377 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.35□□□□□ -1.39
CTNNA1P35221 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.35□□□□□ -1.39
CTNNA1P35221 MIR212-201ENST00000586026 110 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 AC063977.7-201ENST00000594454 337 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 AP001823.1-201ENST00000604056 1003 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 LSM1P2-201ENST00000604911 322 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 AC007204.1-201ENST00000621794 555 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 AC015660.5-201ENST00000623238 564 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CTNNA1P35221 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
CTNNA1P35221 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 AL161756.3-201ENST00000641216 2071 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 AP000432.2-201ENST00000624164 2048 ntBASIC6.35□□□□□ -1.39
CTNNA1P35221 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CTNNA1P35221 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTNNA1P35221 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CTNNA1P35221 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CTNNA1P35221 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CTNNA1P35221 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 EIF3EP1-201ENST00000433978 1316 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC007842.1-201ENST00000597336 2039 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA1P35221 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 YWHAZP4-201ENST00000392459 708 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 SEPT7P8-201ENST00000413308 775 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 MTCO1P51-201ENST00000427672 1060 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA1P35221 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.34□□□□□ -1.39
CTNNA1P35221 RPS18P1-201ENST00000447840 458 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 RARRES2P3-201ENST00000457739 473 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 RN7SL836P-201ENST00000476140 296 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA1P35221 MORF4L2P1-201ENST00000503761 858 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.34□□□□□ -1.39
CTNNA1P35221 snoU109.5-201ENST00000516231 132 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 AP002981.1-201ENST00000517692 975 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTNNA1P35221 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.34□□□□□ -1.39
CTNNA1P35221 MIR3157-201ENST00000578688 85 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.34□□□□□ -1.39
CTNNA1P35221 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.34□□□□□ -1.39
CTNNA1P35221 AC232271.1-201ENST00000602455 2715 ntBASIC6.34□□□□□ -1.39
CTNNA1P35221 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms