Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RN7SKP15-201ENST00000364742 309 ntBASIC6.77□□□□□ -1.33
CIITAP33076 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 AC016739.1-201ENST00000405359 345 ntBASIC6.77□□□□□ -1.33
CIITAP33076 AL451046.1-201ENST00000406097 534 ntBASIC6.77□□□□□ -1.33
CIITAP33076 MIR1282-201ENST00000408865 101 ntBASIC6.77□□□□□ -1.33
CIITAP33076 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.77□□□□□ -1.33
CIITAP33076 NDUFS5P5-201ENST00000437256 321 ntBASIC6.77□□□□□ -1.33
CIITAP33076 TUBB4BP6-201ENST00000437576 479 ntBASIC6.77□□□□□ -1.33
CIITAP33076 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.77□□□□□ -1.33
CIITAP33076 AC144530.1-201ENST00000452862 555 ntBASIC6.77□□□□□ -1.33
CIITAP33076 AC090589.1-201ENST00000473109 362 ntBASIC6.77□□□□□ -1.33
CIITAP33076 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.77□□□□□ -1.33
CIITAP33076 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.77□□□□□ -1.33
CIITAP33076 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.77□□□□□ -1.33
CIITAP33076 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.77□□□□□ -1.33
CIITAP33076 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CIITAP33076 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.77□□□□□ -1.33
CIITAP33076 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.77□□□□□ -1.33
CIITAP33076 AL049779.3-201ENST00000557141 606 ntBASIC6.77□□□□□ -1.33
CIITAP33076 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.77□□□□□ -1.33
CIITAP33076 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CIITAP33076 MIR4776-2-201ENST00000580204 80 ntBASIC6.77□□□□□ -1.33
CIITAP33076 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.77□□□□□ -1.33
CIITAP33076 AL355974.3-201ENST00000617383 467 ntBASIC6.77□□□□□ -1.33
CIITAP33076 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 AC022400.9-201ENST00000623633 273 ntBASIC6.77□□□□□ -1.33
CIITAP33076 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.77□□□□□ -1.33
CIITAP33076 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.77□□□□□ -1.33
CIITAP33076 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 AC027088.4-201ENST00000611559 1947 ntBASIC6.77□□□□□ -1.33
CIITAP33076 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.77□□□□□ -1.33
CIITAP33076 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CIITAP33076 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.77□□□□□ -1.33
CIITAP33076 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.77□□□□□ -1.33
CIITAP33076 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
CIITAP33076 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CIITAP33076 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.76□□□□□ -1.33
CIITAP33076 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CIITAP33076 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CIITAP33076 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 AP000547.3-204ENST00000588548 2523 ntBASIC6.76□□□□□ -1.33
CIITAP33076 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CIITAP33076 OR7E25P-201ENST00000344844 931 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AL121835.1-201ENST00000404250 354 ntBASIC6.76□□□□□ -1.33
CIITAP33076 SNRPEP6-201ENST00000407465 277 ntBASIC6.76□□□□□ -1.33
CIITAP33076 MTND4LP17-201ENST00000414607 293 ntBASIC6.76□□□□□ -1.33
CIITAP33076 CDY8P-201ENST00000428380 1279 ntBASIC6.76□□□□□ -1.33
CIITAP33076 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 EIF5AP4-201ENST00000441206 465 ntBASIC6.76□□□□□ -1.33
CIITAP33076 CDY20P-201ENST00000447528 1279 ntBASIC6.76□□□□□ -1.33
CIITAP33076 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.76□□□□□ -1.33
CIITAP33076 OR7L1P-201ENST00000456181 380 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AL122020.1-201ENST00000472287 459 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AL355032.1-201ENST00000472981 438 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AC124945.1-201ENST00000485133 188 ntBASIC6.76□□□□□ -1.33
CIITAP33076 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CIITAP33076 AC008629.2-201ENST00000503783 483 ntBASIC6.76□□□□□ -1.33
CIITAP33076 SETP21-201ENST00000514799 892 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CIITAP33076 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.76□□□□□ -1.33
CIITAP33076 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.76□□□□□ -1.33
CIITAP33076 AP004609.2-201ENST00000532177 190 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AC244502.2-201ENST00000543361 851 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AC068305.2-201ENST00000550567 1205 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AL356801.1-201ENST00000559320 294 ntBASIC6.76□□□□□ -1.33
CIITAP33076 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.76□□□□□ -1.33
CIITAP33076 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 MIR132-201ENST00000591554 101 ntBASIC6.76□□□□□ -1.33
CIITAP33076 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.76□□□□□ -1.33
CIITAP33076 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.76□□□□□ -1.33
CIITAP33076 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CIITAP33076 AL132656.3-201ENST00000606384 1595 ntBASIC6.76□□□□□ -1.33
CIITAP33076 THAP12P9-201ENST00000503971 2360 ntBASIC6.76□□□□□ -1.33
CIITAP33076 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
CIITAP33076 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CIITAP33076 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CIITAP33076 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CIITAP33076 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.76□□□□□ -1.33
CIITAP33076 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.75□□□□□ -1.33
CIITAP33076 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.75□□□□□ -1.33
CIITAP33076 AL355377.1-201ENST00000621125 1653 ntBASIC6.75□□□□□ -1.33
CIITAP33076 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CIITAP33076 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 RN7SKP128-201ENST00000364270 303 ntBASIC6.75□□□□□ -1.33
CIITAP33076 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.75□□□□□ -1.33
CIITAP33076 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CIITAP33076 MIR1203-201ENST00000408812 85 ntBASIC6.75□□□□□ -1.33
CIITAP33076 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.75□□□□□ -1.33
CIITAP33076 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 AC099677.3-201ENST00000427081 395 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms