Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC093878.1-201ENST00000515630 432 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40LGP29965 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 AC068993.1-201ENST00000546724 589 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 CHEK2P2-201ENST00000554701 672 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 RNU4ATAC-201ENST00000580972 127 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.3□□□□□ -1.56
CD40LGP29965 AL589863.1-201ENST00000595383 631 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 DYNLL1P1-201ENST00000595442 269 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AC091133.5-201ENST00000603088 301 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 NDUFB9P1-201ENST00000604683 510 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 AL035425.4-201ENST00000624509 1063 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 AC007938.2-201ENST00000604666 2634 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 TCP1P3-201ENST00000414406 1498 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 THAP12P9-201ENST00000503971 2360 ntBASIC5.3□□□□□ -1.56
CD40LGP29965 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD40LGP29965 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD40LGP29965 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CD40LGP29965 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD40LGP29965 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD40LGP29965 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD40LGP29965 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC130304.1-201ENST00000622942 2385 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD40LGP29965 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD40LGP29965 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CD40LGP29965 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 MIR138-2-201ENST00000384916 84 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AC245036.1-201ENST00000391727 309 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AC019178.1-201ENST00000392337 440 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 RN7SKP205-201ENST00000410999 307 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 VN1R53P-201ENST00000429536 957 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 MED28P4-201ENST00000433137 572 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.29□□□□□ -1.56
CD40LGP29965 GAPDHP33-201ENST00000443168 1013 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.29□□□□□ -1.56
CD40LGP29965 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 MORF4-201ENST00000447135 971 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 RN7SKP288-201ENST00000516227 268 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.29□□□□□ -1.56
CD40LGP29965 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.29□□□□□ -1.56
CD40LGP29965 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AL121594.2-201ENST00000541658 472 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
CD40LGP29965 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.29□□□□□ -1.56
CD40LGP29965 RPL7AP69-201ENST00000595306 806 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AC245052.7-201ENST00000601161 359 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AL513327.3-201ENST00000602618 469 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 MIR6774-201ENST00000614651 70 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 OR8G7P-201ENST00000616658 848 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 AL137067.2-201ENST00000621202 131 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD40LGP29965 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CD40LGP29965 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CD40LGP29965 RBPJP6-201ENST00000411556 1431 ntBASIC5.29□□□□□ -1.56
CD40LGP29965 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms