Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A1P20908 AC019205.1-201ENST00000421830 730 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AL139148.1-201ENST00000427122 680 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 RPL12P3-201ENST00000440080 396 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A1P20908 CYCSP51-201ENST00000443545 318 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 RPL7L1P3-201ENST00000455249 689 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AC005532.2-201ENST00000467154 373 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 RPL32P33-201ENST00000487023 394 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A1P20908 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A1P20908 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A1P20908 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.65□□□□□ -1.5
COL5A1P20908 AL139407.1-201ENST00000613826 1175 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AC024255.1-201ENST00000614376 102 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AL731566.2-201ENST00000618971 317 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.65□□□□□ -1.5
COL5A1P20908 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.65□□□□□ -1.5
COL5A1P20908 OR11H2-202ENST00000641517 1085 ntBASIC5.65□□□□□ -1.5
COL5A1P20908 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A1P20908 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A1P20908 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A1P20908 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL5A1P20908 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COL5A1P20908 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
COL5A1P20908 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.65□□□□□ -1.51
COL5A1P20908 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
COL5A1P20908 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A1P20908 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A1P20908 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A1P20908 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
COL5A1P20908 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A1P20908 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A1P20908 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.65□□□□□ -1.51
COL5A1P20908 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.65□□□□□ -1.51
COL5A1P20908 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL5A1P20908 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A1P20908 AL645927.1-201ENST00000396783 406 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A1P20908 MRPL53P1-201ENST00000414323 319 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 HMGB1P32-201ENST00000425971 565 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 VDAC1P6-201ENST00000430062 855 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 CNOT7P2-201ENST00000441051 832 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC015983.1-201ENST00000441577 373 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AL445687.2-201ENST00000458156 728 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 AC100832.1-201ENST00000471945 383 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC027667.1-201ENST00000545814 304 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A1P20908 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 PPATP2-201ENST00000605635 508 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC005840.5-201ENST00000619166 599 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC004836.1-201ENST00000623032 634 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AP000550.3-201ENST00000637734 379 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL5A1P20908 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A1P20908 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL5A1P20908 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 LPP-208ENST00000448637 5835 ntTSL 5 BASIC5.64□□□□□ -1.51
COL5A1P20908 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 AC006213.6-201ENST00000623722 4179 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC114786.1-201ENST00000512892 1415 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A1P20908 RPL37P18-201ENST00000411602 243 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.64□□□□□ -1.51
COL5A1P20908 RN7SL172P-201ENST00000460535 303 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AL355032.1-201ENST00000472981 438 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC073610.1-201ENST00000489971 396 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
COL5A1P20908 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL5A1P20908 MIR4260-201ENST00000583107 67 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 RPSAP73-201ENST00000614820 330 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 AC008115.4-201ENST00000619780 775 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.64□□□□□ -1.51
COL5A1P20908 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
COL5A1P20908 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL5A1P20908 AC022819.1-201ENST00000563495 3910 ntBASIC5.64□□□□□ -1.51
COL5A1P20908 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL5A1P20908 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.63□□□□□ -1.51
COL5A1P20908 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
COL5A1P20908 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms