Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
HMGA1P17096 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGA1P17096 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGA1P17096 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 AL360271.1-201ENST00000395679 510 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 AL391422.1-201ENST00000402155 436 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 OR3A2-201ENST00000408891 1076 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 OR2AT2P-201ENST00000413438 905 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGA1P17096 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGA1P17096 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 RN7SL72P-201ENST00000460697 269 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 RN7SL214P-201ENST00000487317 265 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGA1P17096 AC109481.1-201ENST00000509173 282 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGA1P17096 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGA1P17096 AC096996.1-201ENST00000563813 325 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGA1P17096 MIR4489-201ENST00000578869 62 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGA1P17096 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGA1P17096 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGA1P17096 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 GTF2IP4-201ENST00000453092 2054 ntBASIC6.06□□□□□ -1.44
HMGA1P17096 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGA1P17096 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGA1P17096 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGA1P17096 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGA1P17096 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 RN7SKP160-201ENST00000363804 340 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGA1P17096 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC019205.1-201ENST00000421830 730 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 BX510359.3-201ENST00000422168 306 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGA1P17096 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC015983.1-201ENST00000441577 373 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGA1P17096 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC004129.2-201ENST00000457229 287 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 RPS3AP15-201ENST00000483874 781 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGA1P17096 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC007225.2-201ENST00000562529 256 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 MIR1273E-201ENST00000581165 102 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGA1P17096 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 AC009779.8-201ENST00000641684 4384 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 LINC02019-201ENST00000608605 2060 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.05□□□□□ -1.44
HMGA1P17096 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 AC114876.1-201ENST00000490962 1366 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 AC007114.2-201ENST00000576014 4281 ntBASIC6.05□□□□□ -1.44
HMGA1P17096 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGA1P17096 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 YES1P1-201ENST00000418510 1628 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HMGA1P17096 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HMGA1P17096 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGA1P17096 SNORA70H-201ENST00000383910 135 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 SNORA70J-201ENST00000384182 135 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 OR6E1P-201ENST00000414424 923 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 OR5W1P-201ENST00000423705 938 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGA1P17096 FMO7P-201ENST00000436045 768 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 RN7SL570P-201ENST00000484405 292 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms