Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOBP13765 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOBP13765 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DOBP13765 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOBP13765 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DOBP13765 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOBP13765 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOBP13765 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AP002512.4-202ENST00000641599 4530 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 RN7SKP171-201ENST00000364417 303 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 PTCD2P2-201ENST00000415579 1095 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC013268.2-201ENST00000420753 337 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AJ239321.1-201ENST00000424255 564 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AL445528.1-201ENST00000426330 420 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AL392003.1-201ENST00000434394 243 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AL731534.1-201ENST00000434711 269 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC096632.2-201ENST00000438139 1239 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 YRDCP3-201ENST00000456507 480 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 RN7SL352P-201ENST00000466002 277 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 CYP4F27P-201ENST00000514557 494 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AP001804.1-201ENST00000526868 919 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 MIR4701-201ENST00000583094 63 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC098483.2-201ENST00000603158 454 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 uc_338.31-201ENST00000615595 186 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC048341.3-201ENST00000619323 491 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC111152.1-202ENST00000635848 339 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AC027575.3-201ENST00000583058 2747 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.44□□□□□ -1.54
HLA-DOBP13765 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DOBP13765 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AC068446.1-201ENST00000556425 1549 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOBP13765 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOBP13765 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DOBP13765 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 FUNDC2P3-201ENST00000334716 533 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 SNORA21-201ENST00000362423 132 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 AL121835.1-201ENST00000404250 354 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 RPS15AP30-201ENST00000420976 390 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 IGLV3-4-201ENST00000432300 244 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 AL590762.3-201ENST00000436372 640 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DOBP13765 RPL23AP60-201ENST00000450011 454 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 C1DP3-201ENST00000455013 423 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.43□□□□□ -1.54
HLA-DOBP13765 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms