Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL672167.3-201ENST00000465951 960 ntBASIC9.78□□□□□ -0.84
CFTRP13569 AC090142.2-201ENST00000483263 416 ntBASIC9.78□□□□□ -0.84
CFTRP13569 OR51A1P-201ENST00000511110 946 ntBASIC9.78□□□□□ -0.84
CFTRP13569 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC9.78□□□□□ -0.84
CFTRP13569 NOP10-202ENST00000557912 436 ntTSL 2 BASIC9.78□□□□□ -0.84
CFTRP13569 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC9.78□□□□□ -0.84
CFTRP13569 RBM22P1-201ENST00000578589 1214 ntBASIC9.78□□□□□ -0.84
CFTRP13569 AC012557.1-201ENST00000607115 611 ntBASIC9.78□□□□□ -0.84
CFTRP13569 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CFTRP13569 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
CFTRP13569 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CFTRP13569 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.77□□□□□ -0.84
CFTRP13569 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
CFTRP13569 AL662795.2-201ENST00000624252 3706 ntBASIC9.77□□□□□ -0.85
CFTRP13569 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.77□□□□□ -0.85
CFTRP13569 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.77□□□□□ -0.85
CFTRP13569 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.77□□□□□ -0.85
CFTRP13569 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC9.77□□□□□ -0.85
CFTRP13569 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
CFTRP13569 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
CFTRP13569 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 DSTNP5-201ENST00000427921 523 ntBASIC9.77□□□□□ -0.85
CFTRP13569 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC9.77□□□□□ -0.85
CFTRP13569 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC9.77□□□□□ -0.85
CFTRP13569 AC013701.1-201ENST00000522657 465 ntBASIC9.77□□□□□ -0.85
CFTRP13569 RPL10P14-201ENST00000565265 298 ntBASIC9.77□□□□□ -0.85
CFTRP13569 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.77□□□□□ -0.85
CFTRP13569 AC009163.6-201ENST00000612367 342 ntBASIC9.77□□□□□ -0.85
CFTRP13569 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.77□□□□□ -0.85
CFTRP13569 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
CFTRP13569 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
CFTRP13569 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
CFTRP13569 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.76□□□□□ -0.85
CFTRP13569 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
CFTRP13569 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 RNU4-2-201ENST00000365668 141 ntBASIC9.76□□□□□ -0.85
CFTRP13569 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 RPS6P23-201ENST00000413224 722 ntBASIC9.76□□□□□ -0.85
CFTRP13569 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC9.76□□□□□ -0.85
CFTRP13569 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC9.76□□□□□ -0.85
CFTRP13569 AK3P5-201ENST00000432033 519 ntBASIC9.76□□□□□ -0.85
CFTRP13569 AC092106.1-201ENST00000444291 373 ntBASIC9.76□□□□□ -0.85
CFTRP13569 AC090114.3-201ENST00000479267 829 ntBASIC9.76□□□□□ -0.85
CFTRP13569 AL035690.1-201ENST00000490892 383 ntBASIC9.76□□□□□ -0.85
CFTRP13569 CEACAMP10-202ENST00000495431 496 ntBASIC9.76□□□□□ -0.85
CFTRP13569 AC105233.1-201ENST00000498840 781 ntBASIC9.76□□□□□ -0.85
CFTRP13569 MIR4311-201ENST00000580794 100 ntBASIC9.76□□□□□ -0.85
CFTRP13569 AC087783.2-201ENST00000605070 562 ntBASIC9.76□□□□□ -0.85
CFTRP13569 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
CFTRP13569 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.76□□□□□ -0.85
CFTRP13569 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.76□□□□□ -0.85
CFTRP13569 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
CFTRP13569 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
CFTRP13569 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
CFTRP13569 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.75□□□□□ -0.85
CFTRP13569 NCOA4P3-201ENST00000513203 1877 ntBASIC9.75□□□□□ -0.85
CFTRP13569 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CFTRP13569 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
CFTRP13569 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.75□□□□□ -0.85
CFTRP13569 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.75□□□□□ -0.85
CFTRP13569 AC015864.1-201ENST00000496512 544 ntBASIC9.75□□□□□ -0.85
CFTRP13569 IGLV3-24-201ENST00000517477 197 ntBASIC9.75□□□□□ -0.85
CFTRP13569 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC9.75□□□□□ -0.85
CFTRP13569 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
CFTRP13569 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CFTRP13569 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
CFTRP13569 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
CFTRP13569 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.75□□□□□ -0.85
CFTRP13569 AC119674.1-213ENST00000641177 1386 ntBASIC9.75□□□□□ -0.85
CFTRP13569 AC127070.3-201ENST00000503695 3263 ntBASIC9.75□□□□□ -0.85
CFTRP13569 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.74□□□□□ -0.85
CFTRP13569 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.74□□□□□ -0.85
CFTRP13569 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
CFTRP13569 CYB5AP4-201ENST00000396692 399 ntBASIC9.74□□□□□ -0.85
CFTRP13569 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
CFTRP13569 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
CFTRP13569 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms