Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 RNA5SP477-201ENST00000362639 119 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL445238.1-204ENST00000400311 463 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 NPM1P38-201ENST00000403835 865 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 UBE2V1P14-201ENST00000415815 558 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 RPS17P17-201ENST00000419392 409 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 RPL12P43-201ENST00000420608 499 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC104843.2-201ENST00000427666 297 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 CDY8P-201ENST00000428380 1279 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 CDY20P-201ENST00000447528 1279 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 OR2AF1P-201ENST00000454899 889 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 CST12P-201ENST00000457644 362 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 ACA64.1-201ENST00000459171 127 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 RPL5P12-201ENST00000477071 851 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 NPM1P27-201ENST00000502784 830 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 OR5H7P-201ENST00000514084 930 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL121579.2-201ENST00000555466 590 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 MIR3614-201ENST00000581261 86 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC008521.2-201ENST00000591021 259 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC108673.3-201ENST00000609183 335 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC022106.1-201ENST00000612834 766 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 MIR6862-1-201ENST00000613016 70 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 MIR6862-2-201ENST00000614755 70 ntBASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB40ALP0C0E4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC022325.1-201ENST00000502748 2199 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 GUCY1B2-204ENST00000531898 1979 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 RNA5SP510-201ENST00000364697 99 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 RN7SKP78-201ENST00000364711 318 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 RNU6-891P-201ENST00000384280 111 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AL360271.1-201ENST00000395679 510 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 LYPLA1P3-201ENST00000402650 695 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 RPL23AP19-201ENST00000436229 369 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC016908.1-201ENST00000442571 1219 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 GAPDHP23-201ENST00000444823 993 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 FTLP8-201ENST00000446770 267 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 SNORA81.2-201ENST00000516868 170 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC078878.1-201ENST00000539832 958 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC073916.1-201ENST00000545095 130 ntBASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB40ALP0C0E4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms