Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC6P09630 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC6P09630 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC6P09630 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HOXC6P09630 AC241584.2-201ENST00000637142 2090 ntBASIC6.77□□□□□ -1.33
HOXC6P09630 TMEM75-201ENST00000624314 2165 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC235565.1-201ENST00000456962 1325 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
HOXC6P09630 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 PARP4P2-201ENST00000446672 3326 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 RN7SKP124-201ENST00000364730 341 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 MRPL53P1-201ENST00000414323 319 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC6P09630 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC6P09630 HSPE1P27-201ENST00000430808 296 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXC6P09630 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 RPS27AP3-201ENST00000453803 454 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC073594.1-201ENST00000462065 364 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 COPS8P2-201ENST00000473228 627 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 SIAH1P1-201ENST00000479411 923 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 RNU6-751P-201ENST00000516382 101 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC6P09630 AP005639.1-201ENST00000526939 192 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 EIF4EP5-201ENST00000528228 640 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 OR4A42P-201ENST00000531397 938 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC027026.1-201ENST00000532323 742 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXC6P09630 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 AC091193.1-201ENST00000604640 448 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 MIR6730-201ENST00000622213 67 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC119674.1-213ENST00000641177 1386 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 AC011369.2-201ENST00000624423 1567 ntBASIC6.76□□□□□ -1.33
HOXC6P09630 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.76□□□□□ -1.33
HOXC6P09630 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC6P09630 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC6P09630 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HOXC6P09630 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC6P09630 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC6P09630 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HOXC6P09630 OR10R3P-201ENST00000361688 942 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXC6P09630 AC007394.1-201ENST00000421941 531 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 TPTE2P1-204ENST00000435256 593 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 AL022237.1-201ENST00000446663 358 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 AL133445.1-201ENST00000467051 452 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 MTCO3P42-201ENST00000509488 518 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC6P09630 MTCO3P39-201ENST00000514812 518 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 SNORA43.3-201ENST00000517240 103 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXC6P09630 AC022616.2-201ENST00000523185 300 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 DPPA2P4-201ENST00000563717 878 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC6P09630 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 AC011497.2-201ENST00000600255 639 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 IMMP1LP3-201ENST00000604197 224 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 AL450226.2-201ENST00000622913 439 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 AC022919.1-201ENST00000624979 626 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXC6P09630 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXC6P09630 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
HOXC6P09630 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 AC097634.1-201ENST00000604491 2467 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 SALL4P7-201ENST00000555779 3120 ntBASIC6.75□□□□□ -1.33
HOXC6P09630 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC6P09630 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HOXC6P09630 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC6P09630 AC008957.3-201ENST00000624112 2242 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC096921.2-201ENST00000561507 1916 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms