Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 AC093909.5-201ENST00000621839 1799 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.56□□□□□ -1.52
MT-ND1P03886 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.56□□□□□ -1.52
MT-ND1P03886 BCORP1-203ENST00000513194 5093 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 THAP12P9-201ENST00000503971 2360 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 RPL11P4-201ENST00000332269 436 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 AL035696.2-201ENST00000407941 709 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.56□□□□□ -1.52
MT-ND1P03886 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 MTND2P12-201ENST00000417560 1252 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 NME1P1-201ENST00000420914 382 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 RPS15AP30-201ENST00000420976 390 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 RPL7AP14-201ENST00000424041 802 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 RBMY2HP-201ENST00000457961 720 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 AP002371.1-201ENST00000463604 433 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.56□□□□□ -1.52
MT-ND1P03886 AC007346.2-201ENST00000564816 892 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 MIR3157-201ENST00000578688 85 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 AC063977.7-201ENST00000594454 337 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.56□□□□□ -1.52
MT-ND1P03886 MIR6885-201ENST00000612241 66 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
MT-ND1P03886 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
MT-ND1P03886 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 DDX18P6-201ENST00000450119 1997 ntBASIC5.56□□□□□ -1.52
MT-ND1P03886 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.56□□□□□ -1.52
MT-ND1P03886 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.56□□□□□ -1.52
MT-ND1P03886 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
MT-ND1P03886 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MT-ND1P03886 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MT-ND1P03886 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MT-ND1P03886 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.55□□□□□ -1.52
MT-ND1P03886 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MT-ND1P03886 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 RNA5SP77-201ENST00000365394 120 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AC087752.1-201ENST00000391360 558 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 PRELID1P1-201ENST00000403549 660 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 MYL6P5-201ENST00000412707 459 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AL096829.1-201ENST00000413677 457 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AL603882.1-201ENST00000463059 681 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 RPL34P33-201ENST00000486062 334 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC090958.1-201ENST00000511122 351 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AC111000.6-201ENST00000514471 709 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 SNORA74.1-201ENST00000516320 180 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC119403.2-201ENST00000590960 598 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AL583832.1-201ENST00000603227 784 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AL133481.2-203ENST00000607558 139 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AC022960.2-201ENST00000616300 666 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AL355974.3-201ENST00000617383 467 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 RNA5SP439-201ENST00000617595 124 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 AC096708.4-201ENST00000620563 552 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.55□□□□□ -1.52
MT-ND1P03886 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms