Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 CASC19-255ENST00000641733 1385 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AL139805.1-201ENST00000407837 289 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 RNA5SP156-201ENST00000410250 110 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 RNA5SP198-201ENST00000410376 127 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC013410.2-201ENST00000422627 201 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC064862.5-201ENST00000440618 334 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 MTND5P8-201ENST00000449817 1083 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 RPS7P10-201ENST00000464254 603 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 MRPL57P6-201ENST00000506570 309 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 NACAP5-201ENST00000509863 636 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 OR4R2P-201ENST00000530815 597 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AP001357.1-201ENST00000586304 1053 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC040174.2-201ENST00000602701 465 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AL158211.2-201ENST00000607282 395 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 OR7M1P-201ENST00000608946 533 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AC012676.3-201ENST00000614983 479 ntBASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TCRBV7S3A2A0A539 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC087516.1-201ENST00000561236 2428 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC011933.2-201ENST00000578539 2790 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 SNORA21-201ENST00000362423 132 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AL358178.1-201ENST00000407698 397 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 UBE2V1P15-201ENST00000407776 448 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 MYL6P5-201ENST00000412707 459 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AL035422.1-201ENST00000414193 397 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 RPL35AP31-201ENST00000418340 337 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC017019.1-201ENST00000426129 261 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 RPS12P17-201ENST00000438591 377 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 KRT8P51-201ENST00000438938 274 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC016027.4-201ENST00000450866 277 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 C1DP3-201ENST00000455013 423 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 ST13P12-201ENST00000508958 1094 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 CR383658.1-201ENST00000514609 734 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 RNU6-760P-201ENST00000516078 97 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 snoU109.5-201ENST00000516231 132 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC113191.1-201ENST00000517759 403 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms