Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SNRPFP2-201ENST00000440710 251 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC068305.2-201ENST00000550567 1205 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 AL136520.1-202ENST00000555494 763 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 MIR4701-201ENST00000583094 63 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 RN7SL475P-201ENST00000583379 298 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 AL136370.1-201ENST00000608166 691 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC241377.1-201ENST00000619797 406 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AP001885.1-201ENST00000621658 558 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
USP35Q9P2H5 AC011503.2-201ENST00000594230 1500 ntBASIC8.68□□□□□ -1.02
USP35Q9P2H5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
USP35Q9P2H5 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 RNA5SP514-201ENST00000363717 111 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 RNA5SP242-201ENST00000364171 118 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AL606490.7-201ENST00000433136 191 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 EMC3-AS1-205ENST00000438698 534 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AL161636.2-201ENST00000445179 927 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 BX284613.1-201ENST00000452221 1641 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AP002345.1-201ENST00000456493 928 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 RPL17P2-201ENST00000491913 451 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC090543.1-201ENST00000492168 485 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AL158068.1-201ENST00000506116 616 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 MTND3P24-201ENST00000506306 329 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC008628.1-201ENST00000508663 265 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC095052.1-201ENST00000509955 863 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 HMGB1P47-201ENST00000511281 589 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 RPL7L1P4-201ENST00000513004 707 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 RNU6-889P-201ENST00000517189 103 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC090022.1-201ENST00000546569 311 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC008126.1-201ENST00000549019 480 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 MIR6826-201ENST00000617808 98 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 MIR6085-201ENST00000618314 110 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 FAM27E2-201ENST00000619668 403 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 AC021422.1-201ENST00000621212 473 ntBASIC8.67□□□□□ -1.02
USP35Q9P2H5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
USP35Q9P2H5 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
USP35Q9P2H5 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC096992.2-201ENST00000609553 1684 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC005618.1-201ENST00000606901 3148 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 RNA5SP284-201ENST00000384547 118 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 RNA5SP178-201ENST00000410380 128 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 DSTNP5-201ENST00000427921 523 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 EIF2S2P3-201ENST00000428356 999 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 MTND2P25-201ENST00000449028 610 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms