Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 YWHAZP6-201ENST00000399764 738 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 DHFRP2-201ENST00000414224 547 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AL357078.2-201ENST00000416486 427 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 GAPDHP59-201ENST00000435908 267 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 LDHAP2-201ENST00000437325 985 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 SLC25A51P1-201ENST00000468432 871 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 RPL12P31-201ENST00000478433 450 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AP002884.1-201ENST00000479691 655 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC090568.1-201ENST00000509499 856 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC104997.1-201ENST00000519761 717 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 OR10D4P-201ENST00000525892 951 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AP001804.1-201ENST00000526868 919 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 RPA2P3-201ENST00000533268 770 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC090651.1-201ENST00000567865 634 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC126365.2-201ENST00000580630 379 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 SNORA74.4-201ENST00000607595 199 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AL355816.2-201ENST00000610049 647 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AL135999.3-201ENST00000610501 812 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC010998.3-201ENST00000613871 631 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 OR7E91P-202ENST00000642062 1198 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 AL512283.1-201ENST00000606756 1384 ntBASIC6.43□□□□□ -1.38
USP29Q9HBJ7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.43□□□□□ -1.38
USP29Q9HBJ7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 RNA5SP77-201ENST00000365394 120 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 RNA5SP279-201ENST00000365513 117 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AL139805.1-201ENST00000407837 289 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 RN7SKP151-201ENST00000410230 316 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AL354707.3-201ENST00000427308 331 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 KCTD9P1-201ENST00000430462 1167 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC069154.1-201ENST00000432914 542 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC007679.3-201ENST00000434035 414 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC079922.1-201ENST00000443291 359 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 OR6C72P-201ENST00000451403 892 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AP003049.1-201ENST00000529418 457 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC012414.2-201ENST00000559474 187 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC022400.9-201ENST00000623633 273 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC025262.3-201ENST00000623666 360 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC003992.1-201ENST00000635364 557 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC092070.2-203ENST00000598377 3644 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 IFIT1P1-201ENST00000400497 1449 ntBASIC6.42□□□□□ -1.38
USP29Q9HBJ7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
USP29Q9HBJ7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.41□□□□□ -1.38
USP29Q9HBJ7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USP29Q9HBJ7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USP29Q9HBJ7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms