Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC026951.2-201ENST00000613847 241 ntBASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 AC025262.3-201ENST00000623666 360 ntBASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 OR5BE1P-202ENST00000641168 1176 ntBASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SEC61A2Q9H9S3 CDY19P-201ENST00000411668 1613 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 CDY18P-201ENST00000438294 1609 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AP002800.1-201ENST00000624982 2225 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MAPK10-270ENST00000641102 3538 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RPL9P21-201ENST00000392269 505 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 TATDN1P1-201ENST00000414123 891 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MTND4LP11-201ENST00000422184 280 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC011233.1-201ENST00000422812 283 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 LSM3P3-201ENST00000436601 306 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MTND4P25-201ENST00000441039 533 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RPL6P5-201ENST00000445678 828 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 BMI1P1-201ENST00000445879 941 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 PSMA6P2-201ENST00000457574 686 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 BX323845.2-201ENST00000458382 234 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC092691.2-201ENST00000461787 803 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RPSAP48-201ENST00000466509 889 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MTND3P7-201ENST00000474435 343 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RPL21P42-201ENST00000488408 464 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RN7SL518P-201ENST00000491887 280 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MTND6P8-201ENST00000503471 522 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC109927.2-201ENST00000506416 303 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MTCO3P7-201ENST00000510008 774 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 SCARNA18.2-201ENST00000516882 84 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC079064.1-201ENST00000528365 362 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC124891.1-201ENST00000536322 519 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC026458.1-201ENST00000564330 438 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MIR4801-201ENST00000582704 82 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MIR8082-201ENST00000612488 81 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AL161420.1-201ENST00000619393 264 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC027506.1-201ENST00000621395 198 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AL359715.5-201ENST00000623431 443 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC026108.1-201ENST00000635444 547 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms