Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL138899.2-201ENST00000439139 499 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 OTX2P1-201ENST00000450956 354 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC126615.1-201ENST00000470084 630 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 STMN1P2-201ENST00000508435 439 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC233724.10-201ENST00000510454 409 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 NDUFB4P12-201ENST00000513465 390 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AP003084.1-201ENST00000524828 742 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AP003072.1-201ENST00000531740 145 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC090695.1-201ENST00000561269 1222 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 U73023.1-201ENST00000603134 700 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC103792.1-201ENST00000603591 919 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC019257.2-201ENST00000605539 497 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AC009237.15-201ENST00000610252 501 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AL713922.2-201ENST00000619384 716 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 RN7SL680P-201ENST00000620379 299 ntBASIC8.62□□□□□ -1.03
TRIM47Q96LD4 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM47Q96LD4 AL590065.1-201ENST00000603371 4774 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 Z99129.4-201ENST00000624649 2435 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 U3.4-201ENST00000363352 213 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RN7SKP36-201ENST00000363997 312 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC121334.1-201ENST00000396414 802 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL603865.2-201ENST00000401679 213 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL031577.2-201ENST00000404133 280 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RN7SKP148-201ENST00000410179 275 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RPL12P43-201ENST00000420608 499 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RPL7P53-201ENST00000421245 739 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL139158.1-201ENST00000424719 340 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 MTCO1P43-201ENST00000431831 488 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 GAPDHP75-201ENST00000433910 943 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC108059.2-201ENST00000434626 151 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 WDR82P2-201ENST00000444540 928 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 NFU1P2-201ENST00000448700 469 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 CCNJP1-201ENST00000450600 1149 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RPL31P53-201ENST00000457065 348 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RPL30P6-201ENST00000475925 342 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RN7SL849P-201ENST00000485236 295 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC093890.1-201ENST00000502554 540 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC233724.1-201ENST00000503894 233 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC025459.1-201ENST00000504072 156 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 SUMO2P17-201ENST00000504438 285 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 UBE2CP1-201ENST00000557130 554 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AL022154.1-201ENST00000604698 785 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 MIR6885-201ENST00000612241 66 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC080112.3-201ENST00000612552 880 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC005609.2-201ENST00000623320 592 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms