Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SKP257-201ENST00000364525 309 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RNU6-876P-201ENST00000391295 104 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL161787.1-201ENST00000401543 174 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 OR52N3P-201ENST00000413417 934 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC109638.1-201ENST00000417406 326 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL160175.1-201ENST00000428124 247 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MED14P1-201ENST00000430517 648 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL590103.1-201ENST00000434488 307 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 ARL5AP3-201ENST00000439327 386 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 UBE2V1P3-201ENST00000439651 417 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 TCEA1P3-201ENST00000443005 880 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL136454.1-201ENST00000443181 466 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MTCYBP42-201ENST00000444653 1130 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC007327.1-201ENST00000447461 264 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 PAXBP1P1-201ENST00000449315 447 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SL464P-201ENST00000492743 297 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 HPRT1P2-201ENST00000505250 544 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC107385.1-201ENST00000507985 778 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 NATP-201ENST00000523491 878 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AP001207.1-201ENST00000524051 481 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC011611.6-201ENST00000547483 255 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SL786P-201ENST00000579130 298 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SL237P-201ENST00000580912 287 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SL657P-201ENST00000582431 293 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SL25P-201ENST00000583862 260 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC008507.1-201ENST00000587506 734 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL049840.6-201ENST00000604583 345 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RN7SL301P-202ENST00000618767 298 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC239600.2-201ENST00000619615 1165 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MIR3688-2-201ENST00000636963 87 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 LRRC77P-213ENST00000637727 880 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AL359922.3-201ENST00000624779 1670 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MTND5P11-201ENST00000511037 1812 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC083806.2-201ENST00000617795 2685 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AP000705.2-201ENST00000433524 1386 ntBASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
FOXR1Q6PIV2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 639.3 ms