Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.91□□□□□ -1.62
SSBP1Q04837 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 OR4C49P-201ENST00000563891 900 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 AC106730.2-201ENST00000566641 540 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AL357562.1-201ENST00000624911 609 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC119674.1-217ENST00000641942 1086 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSBP1Q04837 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC011933.2-201ENST00000578539 2790 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC079097.1-201ENST00000512187 1399 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 GTF2IP4-201ENST00000453092 2054 ntBASIC4.9□□□□□ -1.62
SSBP1Q04837 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.9□□□□□ -1.62
SSBP1Q04837 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSBP1Q04837 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSBP1Q04837 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.9□□□□□ -1.62
SSBP1Q04837 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSBP1Q04837 GNL2P1-201ENST00000451274 2190 ntBASIC4.9□□□□□ -1.62
SSBP1Q04837 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSBP1Q04837 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AL121878.1-201ENST00000418638 859 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 THEM7P-201ENST00000419556 672 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 PPIAP23-201ENST00000420099 497 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 OSTCP4-201ENST00000424397 449 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 TMEM183AP1-205ENST00000432739 290 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.9□□□□□ -1.63
SSBP1Q04837 NDUFB4P8-201ENST00000435351 367 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 AL592114.2-201ENST00000440142 532 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC023245.1-201ENST00000468501 517 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC093664.1-201ENST00000511779 289 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.9□□□□□ -1.63
SSBP1Q04837 MIR378H-201ENST00000579966 83 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC010487.1-201ENST00000594408 1172 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC009220.2-201ENST00000489759 1751 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 AL022322.2-201ENST00000624072 20397 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SSBP1Q04837 AC119674.1-202ENST00000641333 1860 ntBASIC4.9□□□□□ -1.63
SSBP1Q04837 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSBP1Q04837 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SSBP1Q04837 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP1Q04837 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.89□□□□□ -1.63
SSBP1Q04837 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSBP1Q04837 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP1Q04837 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.89□□□□□ -1.63
SSBP1Q04837 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP1Q04837 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP1Q04837 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.89□□□□□ -1.63
SSBP1Q04837 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSBP1Q04837 OR9K1P-201ENST00000326513 941 ntBASIC4.89□□□□□ -1.63
SSBP1Q04837 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSBP1Q04837 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms