Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC025283.1-201ENST00000572039 734 ntBASIC6.58□□□□□ -1.36
TPM4P67936 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM4P67936 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
TPM4P67936 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM4P67936 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 NDUFB9P1-201ENST00000604683 510 ntBASIC6.58□□□□□ -1.36
TPM4P67936 AC097641.3-201ENST00000613523 464 ntBASIC6.58□□□□□ -1.36
TPM4P67936 AC015712.7-201ENST00000615211 635 ntBASIC6.58□□□□□ -1.36
TPM4P67936 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM4P67936 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM4P67936 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM4P67936 UBTFL2-201ENST00000411859 1191 ntBASIC6.57□□□□□ -1.36
TPM4P67936 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM4P67936 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM4P67936 RNGTTP1-201ENST00000420965 728 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM4P67936 PSMD10P2-201ENST00000432890 672 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM4P67936 AC242426.1-201ENST00000435270 960 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AC023271.1-201ENST00000445936 1090 ntBASIC6.57□□□□□ -1.36
TPM4P67936 ZNF619P1-201ENST00000446539 752 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AC097359.1-201ENST00000447946 463 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM4P67936 AL034369.1-201ENST00000453808 477 ntBASIC6.57□□□□□ -1.36
TPM4P67936 RPL38P3-201ENST00000484463 213 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AC073648.3-201ENST00000504939 925 ntBASIC6.57□□□□□ -1.36
TPM4P67936 MIR2117-201ENST00000516780 80 ntBASIC6.57□□□□□ -1.36
TPM4P67936 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.57□□□□□ -1.36
TPM4P67936 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM4P67936 AC027216.1-201ENST00000577726 685 ntBASIC6.57□□□□□ -1.36
TPM4P67936 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.57□□□□□ -1.36
TPM4P67936 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.57□□□□□ -1.36
TPM4P67936 AL645933.2-201ENST00000606743 1207 ntBASIC6.57□□□□□ -1.36
TPM4P67936 AC022400.9-201ENST00000623633 273 ntBASIC6.57□□□□□ -1.36
TPM4P67936 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.57□□□□□ -1.36
TPM4P67936 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TPM4P67936 RBMY1HP-201ENST00000382759 1389 ntBASIC6.57□□□□□ -1.36
TPM4P67936 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
TPM4P67936 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 RPL11P4-201ENST00000332269 436 ntBASIC6.56□□□□□ -1.36
TPM4P67936 RN7SKP185-201ENST00000362813 326 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TPM4P67936 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM4P67936 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TPM4P67936 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TPM4P67936 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM4P67936 NPM1P18-201ENST00000434232 732 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM4P67936 MEMO1P4-201ENST00000453590 386 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AC006539.1-201ENST00000481419 501 ntBASIC6.56□□□□□ -1.36
TPM4P67936 RPS7P11-201ENST00000484240 586 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AC095052.1-201ENST00000509955 863 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM4P67936 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.56□□□□□ -1.36
TPM4P67936 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 OR7E158P-201ENST00000524483 910 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM4P67936 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.56□□□□□ -1.36
TPM4P67936 TDGP1-201ENST00000543961 1229 ntBASIC6.56□□□□□ -1.36
TPM4P67936 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM4P67936 AC090286.3-201ENST00000573133 187 ntBASIC6.56□□□□□ -1.36
TPM4P67936 RN7SL32P-201ENST00000580514 281 ntBASIC6.56□□□□□ -1.36
TPM4P67936 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TPM4P67936 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.56□□□□□ -1.36
TPM4P67936 AC010487.1-201ENST00000594408 1172 ntBASIC6.56□□□□□ -1.36
TPM4P67936 NANOGP3-201ENST00000605855 286 ntBASIC6.56□□□□□ -1.36
TPM4P67936 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 AL157762.1-201ENST00000619612 415 ntBASIC6.56□□□□□ -1.36
TPM4P67936 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.56□□□□□ -1.36
TPM4P67936 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms