Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.07□□□□□ -1.76
RPL39P62891 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.07□□□□□ -1.76
RPL39P62891 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.07□□□□□ -1.76
RPL39P62891 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.07□□□□□ -1.76
RPL39P62891 DPPA3P2-202ENST00000557188 1219 ntBASIC4.07□□□□□ -1.76
RPL39P62891 AC019322.1-201ENST00000571869 389 ntBASIC4.07□□□□□ -1.76
RPL39P62891 AC025283.1-201ENST00000572039 734 ntBASIC4.07□□□□□ -1.76
RPL39P62891 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.07□□□□□ -1.76
RPL39P62891 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.07□□□□□ -1.76
RPL39P62891 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.07□□□□□ -1.76
RPL39P62891 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.07□□□□□ -1.76
RPL39P62891 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.07□□□□□ -1.76
RPL39P62891 AC068726.1-201ENST00000610993 341 ntBASIC4.07□□□□□ -1.76
RPL39P62891 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RPL39P62891 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.07□□□□□ -1.76
RPL39P62891 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RPL39P62891 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.07□□□□□ -1.76
RPL39P62891 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RPL39P62891 AL161912.4-201ENST00000623889 2468 ntBASIC4.06□□□□□ -1.76
RPL39P62891 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 AC092646.2-201ENST00000431242 2095 ntBASIC4.06□□□□□ -1.76
RPL39P62891 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.06□□□□□ -1.76
RPL39P62891 RNA5SP77-201ENST00000365394 120 ntBASIC4.06□□□□□ -1.76
RPL39P62891 SNORD94-201ENST00000386037 137 ntBASIC4.06□□□□□ -1.76
RPL39P62891 U3.28-201ENST00000391249 210 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.06□□□□□ -1.76
RPL39P62891 RPS4XP5-201ENST00000419038 768 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.06□□□□□ -1.76
RPL39P62891 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.06□□□□□ -1.76
RPL39P62891 AL445928.1-201ENST00000435545 222 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC015983.1-201ENST00000441577 373 ntBASIC4.06□□□□□ -1.76
RPL39P62891 HMGN1P32-201ENST00000441744 256 ntBASIC4.06□□□□□ -1.76
RPL39P62891 SEPT14P12-201ENST00000442280 560 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC023141.8-201ENST00000442554 208 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.06□□□□□ -1.76
RPL39P62891 NPM1P9-201ENST00000453156 844 ntBASIC4.06□□□□□ -1.76
RPL39P62891 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.06□□□□□ -1.76
RPL39P62891 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.06□□□□□ -1.76
RPL39P62891 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 DEFB109A-201ENST00000482450 265 ntBASIC4.06□□□□□ -1.76
RPL39P62891 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 AC015524.1-201ENST00000491585 472 ntBASIC4.06□□□□□ -1.76
RPL39P62891 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.06□□□□□ -1.76
RPL39P62891 AC105384.2-201ENST00000508433 640 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.06□□□□□ -1.76
RPL39P62891 AC110056.1-201ENST00000525759 911 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC084851.2-201ENST00000530377 364 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC124891.1-201ENST00000536322 519 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AP000619.2-201ENST00000546014 969 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC068408.1-201ENST00000577406 1144 ntBASIC4.06□□□□□ -1.76
RPL39P62891 RN7SL32P-201ENST00000580514 281 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 AC010503.3-201ENST00000594355 540 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AC036176.3-201ENST00000602456 418 ntBASIC4.06□□□□□ -1.76
RPL39P62891 RPSAP75-201ENST00000605848 301 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AL035661.1-201ENST00000620459 1144 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AL357562.1-201ENST00000624911 609 ntBASIC4.06□□□□□ -1.76
RPL39P62891 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RPL39P62891 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.06□□□□□ -1.76
RPL39P62891 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RPL39P62891 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
RPL39P62891 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPL39P62891 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RPL39P62891 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPL39P62891 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.05□□□□□ -1.76
RPL39P62891 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 MIR138-2-201ENST00000384916 84 ntBASIC4.05□□□□□ -1.76
RPL39P62891 MIR1266-201ENST00000408125 84 ntBASIC4.05□□□□□ -1.76
RPL39P62891 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.05□□□□□ -1.76
RPL39P62891 OR52N3P-201ENST00000413417 934 ntBASIC4.05□□□□□ -1.76
RPL39P62891 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms