Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 RNA5SP427-201ENST00000365323 119 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 RN7SKP292-201ENST00000365522 317 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 MIR433-201ENST00000384837 93 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 MIR187-201ENST00000385062 109 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 RNA5SP35-201ENST00000391257 129 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL050305.1-201ENST00000399993 1230 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL079341.1-201ENST00000404701 1207 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC007562.1-201ENST00000421819 517 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 GRPEL2P2-201ENST00000421856 670 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC016027.5-201ENST00000427227 210 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC114402.2-201ENST00000432760 643 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC023274.2-201ENST00000445264 521 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC012512.1-201ENST00000446594 718 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 UBBP5-201ENST00000446970 266 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC092967.1-201ENST00000449016 481 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 RPL7AP71-201ENST00000451120 739 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC005517.1-201ENST00000452091 489 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL022319.1-201ENST00000458183 1167 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 RPL21P42-201ENST00000488408 464 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 RN7SL776P-201ENST00000493390 268 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC010343.2-201ENST00000510162 224 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 COX6B1P4-201ENST00000519826 484 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 HNRNPCP8-201ENST00000528764 888 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 MIR4800-201ENST00000537353 80 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC024940.3-201ENST00000538551 316 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC007068.2-201ENST00000543168 395 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC126323.4-201ENST00000566935 234 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC090616.1-201ENST00000583895 447 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC012175.1-201ENST00000603755 531 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.25□□□□□ -1.73
CKS1BP61024 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC007671.1-201ENST00000616957 830 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.25□□□□□ -1.73
CKS1BP61024 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 AOX3P-204ENST00000491025 2107 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC025574.1-201ENST00000554784 1653 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.25□□□□□ -1.73
CKS1BP61024 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CKS1BP61024 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.25□□□□□ -1.73
CKS1BP61024 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CKS1BP61024 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 MFSD8-219ENST00000641228 2559 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC005332.5-201ENST00000591222 2919 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
CKS1BP61024 AC092111.2-201ENST00000611627 1414 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CKS1BP61024 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CKS1BP61024 SNORD16-201ENST00000362803 99 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CKS1BP61024 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 RNU11-6P-201ENST00000391127 133 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 RPL5P20-201ENST00000403848 896 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 MIR1231-201ENST00000408101 92 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS1BP61024 AL358176.3-201ENST00000420757 454 ntBASIC4.24□□□□□ -1.73
CKS1BP61024 AL139184.1-202ENST00000422303 222 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms