Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TRIM60P16-201ENST00000444048 694 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 MORF4L1P4-201ENST00000450245 976 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 RPS27AP3-201ENST00000453803 454 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AC104629.2-201ENST00000468627 598 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AC098583.1-201ENST00000480875 255 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 OR52A4P-202ENST00000481634 799 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 SCARNA18.1-201ENST00000516330 83 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.32□□□□□ -1.24
RHBDL3P58872 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.32□□□□□ -1.24
RHBDL3P58872 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.32□□□□□ -1.24
RHBDL3P58872 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.32□□□□□ -1.24
RHBDL3P58872 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.32□□□□□ -1.24
RHBDL3P58872 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.32□□□□□ -1.24
RHBDL3P58872 RNU4ATAC-201ENST00000580972 127 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AC005244.1-201ENST00000582566 339 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AL021368.1-201ENST00000607490 540 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 MIR6793-201ENST00000612376 63 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AC009032.1-201ENST00000617574 431 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AC022726.2-201ENST00000634673 547 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 KARSP1-201ENST00000451871 1752 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 CDC27P2-201ENST00000425026 1922 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RHBDL3P58872 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.32□□□□□ -1.24
RHBDL3P58872 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 AC092821.2-201ENST00000545710 2042 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.32□□□□□ -1.24
RHBDL3P58872 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.32□□□□□ -1.24
RHBDL3P58872 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RHBDL3P58872 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.31□□□□□ -1.24
RHBDL3P58872 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC020633.1-201ENST00000468439 2247 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 FAM32BP-201ENST00000344033 333 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 RNA5SP510-201ENST00000364697 99 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.31□□□□□ -1.24
RHBDL3P58872 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 ST13P16-201ENST00000401760 781 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AL512422.1-201ENST00000407033 553 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 MIR1203-201ENST00000408812 85 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 MTATP6P19-201ENST00000413797 659 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.31□□□□□ -1.24
RHBDL3P58872 MTCO1P45-201ENST00000431457 267 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC011742.2-201ENST00000443818 352 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 PPIAP20-201ENST00000449839 135 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC011476.1-201ENST00000466725 307 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 RN7SL269P-201ENST00000467795 305 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 UBFD1P1-201ENST00000473259 814 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC007998.1-201ENST00000474156 672 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC026254.2-201ENST00000475295 371 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 RN7SL101P-201ENST00000496350 279 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.31□□□□□ -1.24
RHBDL3P58872 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC012146.2-201ENST00000576545 416 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC012213.4-201ENST00000606457 354 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC141002.1-201ENST00000607025 279 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 OR51C1P-201ENST00000608504 942 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC096861.1-201ENST00000616652 240 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AL158062.1-201ENST00000619632 745 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 AC006213.6-201ENST00000623722 4179 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.31□□□□□ -1.24
RHBDL3P58872 HDAC1P2-201ENST00000453661 1398 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 AC092725.2-201ENST00000567658 1389 ntBASIC7.31□□□□□ -1.24
RHBDL3P58872 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.31□□□□□ -1.24
RHBDL3P58872 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RHBDL3P58872 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RHBDL3P58872 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RHBDL3P58872 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
RHBDL3P58872 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RHBDL3P58872 AL358178.1-201ENST00000407698 397 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.3□□□□□ -1.24
RHBDL3P58872 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.3□□□□□ -1.24
RHBDL3P58872 BX284632.2-201ENST00000421091 399 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AL590623.1-201ENST00000427864 105 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 RSL24D1P8-201ENST00000434442 492 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms