Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.76□□□□□ -1.49
VSX2P58304 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.76□□□□□ -1.49
VSX2P58304 AC079807.1-201ENST00000429993 481 ntBASIC5.76□□□□□ -1.49
VSX2P58304 AL445466.1-201ENST00000448432 357 ntBASIC5.76□□□□□ -1.49
VSX2P58304 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 AL358876.1-201ENST00000453364 1075 ntBASIC5.76□□□□□ -1.49
VSX2P58304 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.76□□□□□ -1.49
VSX2P58304 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.76□□□□□ -1.49
VSX2P58304 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VSX2P58304 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 TRIM77BP-201ENST00000524985 1119 ntBASIC5.76□□□□□ -1.49
VSX2P58304 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 HNRNPCP1-201ENST00000556181 766 ntBASIC5.76□□□□□ -1.49
VSX2P58304 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VSX2P58304 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.76□□□□□ -1.49
VSX2P58304 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.76□□□□□ -1.49
VSX2P58304 AC090236.2-201ENST00000587933 1101 ntBASIC5.76□□□□□ -1.49
VSX2P58304 AC027334.1-201ENST00000603257 310 ntBASIC5.76□□□□□ -1.49
VSX2P58304 AC009237.12-201ENST00000604755 742 ntBASIC5.76□□□□□ -1.49
VSX2P58304 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.76□□□□□ -1.49
VSX2P58304 AC108673.3-201ENST00000609183 335 ntBASIC5.76□□□□□ -1.49
VSX2P58304 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VSX2P58304 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.76□□□□□ -1.49
VSX2P58304 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.76□□□□□ -1.49
VSX2P58304 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VSX2P58304 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.76□□□□□ -1.49
VSX2P58304 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.76□□□□□ -1.49
VSX2P58304 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VSX2P58304 GNL2P1-201ENST00000451274 2190 ntBASIC5.76□□□□□ -1.49
VSX2P58304 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VSX2P58304 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VSX2P58304 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.76□□□□□ -1.49
VSX2P58304 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
VSX2P58304 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 RBPJP7-201ENST00000442803 1447 ntBASIC5.75□□□□□ -1.49
VSX2P58304 RBPJP5-201ENST00000449433 1447 ntBASIC5.75□□□□□ -1.49
VSX2P58304 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 AC020656.2-201ENST00000613291 5309 ntBASIC5.75□□□□□ -1.49
VSX2P58304 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VSX2P58304 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VSX2P58304 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.75□□□□□ -1.49
VSX2P58304 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 VN1R3-201ENST00000418822 919 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC066692.1-201ENST00000421721 457 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.75□□□□□ -1.49
VSX2P58304 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VSX2P58304 BX679664.2-201ENST00000439282 283 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC144530.1-201ENST00000452862 555 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC124945.1-201ENST00000485133 188 ntBASIC5.75□□□□□ -1.49
VSX2P58304 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC006499.4-201ENST00000510947 694 ntBASIC5.75□□□□□ -1.49
VSX2P58304 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.75□□□□□ -1.49
VSX2P58304 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 AC007494.1-201ENST00000562293 760 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.75□□□□□ -1.49
VSX2P58304 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.75□□□□□ -1.49
VSX2P58304 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.75□□□□□ -1.49
VSX2P58304 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 uc_338.26-201ENST00000612659 160 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC022400.9-201ENST00000623633 273 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AC129778.1-202ENST00000623812 261 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AL591379.1-207ENST00000635982 261 ntBASIC5.75□□□□□ -1.49
VSX2P58304 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.75□□□□□ -1.49
VSX2P58304 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.75□□□□□ -1.49
VSX2P58304 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VSX2P58304 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 AL121768.1-201ENST00000613917 2544 ntBASIC5.75□□□□□ -1.49
VSX2P58304 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSX2P58304 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VSX2P58304 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.74□□□□□ -1.49
VSX2P58304 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.74□□□□□ -1.49
VSX2P58304 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 RNA5SP273-201ENST00000362484 113 ntBASIC5.74□□□□□ -1.49
VSX2P58304 RNA5SP477-201ENST00000362639 119 ntBASIC5.74□□□□□ -1.49
VSX2P58304 RN7SKP15-201ENST00000364742 309 ntBASIC5.74□□□□□ -1.49
VSX2P58304 SUGT1P2-201ENST00000379452 992 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms