Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.94□□□□□ -1.46
PDX1P52945 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 AL445649.1-201ENST00000615941 691 ntBASIC5.94□□□□□ -1.46
PDX1P52945 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 AC243960.7-201ENST00000623532 707 ntBASIC5.94□□□□□ -1.46
PDX1P52945 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.94□□□□□ -1.46
PDX1P52945 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PDX1P52945 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PDX1P52945 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.94□□□□□ -1.46
PDX1P52945 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
PDX1P52945 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDX1P52945 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.93□□□□□ -1.46
PDX1P52945 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PDX1P52945 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.93□□□□□ -1.46
PDX1P52945 SNX18P3-202ENST00000565670 1750 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AC011504.1-201ENST00000623331 4103 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AL449283.1-201ENST00000602631 3403 ntBASIC5.93□□□□□ -1.46
PDX1P52945 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDX1P52945 RNA5SP242-201ENST00000364171 118 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AP003170.5-201ENST00000397185 335 ntBASIC5.93□□□□□ -1.46
PDX1P52945 RNA5SP156-201ENST00000410250 110 ntBASIC5.93□□□□□ -1.46
PDX1P52945 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 SEPT14P12-201ENST00000442280 560 ntBASIC5.93□□□□□ -1.46
PDX1P52945 HMGN1P36-201ENST00000446623 298 ntBASIC5.93□□□□□ -1.46
PDX1P52945 NPM1P19-201ENST00000450070 712 ntBASIC5.93□□□□□ -1.46
PDX1P52945 RN7SL165P-201ENST00000477476 291 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.93□□□□□ -1.46
PDX1P52945 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.93□□□□□ -1.46
PDX1P52945 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.93□□□□□ -1.46
PDX1P52945 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.93□□□□□ -1.46
PDX1P52945 AC234775.3-201ENST00000564612 656 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.93□□□□□ -1.46
PDX1P52945 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.93□□□□□ -1.46
PDX1P52945 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.93□□□□□ -1.46
PDX1P52945 MIR6793-201ENST00000612376 63 ntBASIC5.93□□□□□ -1.46
PDX1P52945 RNA5SP440-201ENST00000612665 119 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AL157762.1-201ENST00000619612 415 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AC069542.2-201ENST00000624816 216 ntBASIC5.93□□□□□ -1.46
PDX1P52945 LINC01616-201ENST00000561816 2280 ntBASIC5.93□□□□□ -1.46
PDX1P52945 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.93□□□□□ -1.46
PDX1P52945 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 AC011416.1-201ENST00000514947 1732 ntBASIC5.93□□□□□ -1.46
PDX1P52945 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PDX1P52945 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 AF287957.1-201ENST00000607368 1595 ntBASIC5.93□□□□□ -1.46
PDX1P52945 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDX1P52945 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDX1P52945 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.92□□□□□ -1.46
PDX1P52945 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDX1P52945 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.92□□□□□ -1.46
PDX1P52945 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.92□□□□□ -1.46
PDX1P52945 MAPK10-287ENST00000641217 3037 ntBASIC5.92□□□□□ -1.46
PDX1P52945 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.92□□□□□ -1.46
PDX1P52945 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDX1P52945 RNA5SP478-201ENST00000364657 115 ntBASIC5.92□□□□□ -1.46
PDX1P52945 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.92□□□□□ -1.46
PDX1P52945 MIR1203-201ENST00000408812 85 ntBASIC5.92□□□□□ -1.46
PDX1P52945 UBE2V1P14-201ENST00000415815 558 ntBASIC5.92□□□□□ -1.46
PDX1P52945 CYP4F30P-202ENST00000420048 405 ntBASIC5.92□□□□□ -1.46
PDX1P52945 GAPDHP75-201ENST00000433910 943 ntBASIC5.92□□□□□ -1.46
PDX1P52945 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.92□□□□□ -1.46
PDX1P52945 AC092967.1-201ENST00000449016 481 ntBASIC5.92□□□□□ -1.46
PDX1P52945 AC010343.2-201ENST00000510162 224 ntBASIC5.92□□□□□ -1.46
PDX1P52945 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.92□□□□□ -1.46
PDX1P52945 AC090022.1-201ENST00000546569 311 ntBASIC5.92□□□□□ -1.46
PDX1P52945 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.92□□□□□ -1.46
PDX1P52945 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.92□□□□□ -1.46
PDX1P52945 AC024589.2-201ENST00000605642 1294 ntBASIC5.92□□□□□ -1.46
PDX1P52945 AC096708.4-201ENST00000620563 552 ntBASIC5.92□□□□□ -1.46
PDX1P52945 AP003400.2-201ENST00000624036 666 ntBASIC5.92□□□□□ -1.46
PDX1P52945 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.92□□□□□ -1.46
PDX1P52945 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDX1P52945 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.92□□□□□ -1.46
PDX1P52945 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDX1P52945 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
PDX1P52945 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.91□□□□□ -1.46
PDX1P52945 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms