Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.43□□□□□ -1.22
MRE11P49959 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 AC113398.2-201ENST00000507630 558 ntBASIC7.43□□□□□ -1.22
MRE11P49959 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 AC069240.2-201ENST00000550242 609 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 BUB1P1-201ENST00000603541 607 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AC022387.2-201ENST00000604050 448 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AP000484.1-201ENST00000620067 1252 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AC069234.4-201ENST00000621276 412 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.43□□□□□ -1.22
MRE11P49959 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.43□□□□□ -1.22
MRE11P49959 AC093671.1-201ENST00000624981 2929 ntBASIC7.43□□□□□ -1.22
MRE11P49959 SAMM50P1-201ENST00000455403 1399 ntBASIC7.43□□□□□ -1.22
MRE11P49959 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
MRE11P49959 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.43□□□□□ -1.22
MRE11P49959 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
MRE11P49959 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 BIN2P1-201ENST00000504996 1530 ntBASIC7.42□□□□□ -1.22
MRE11P49959 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 AL355488.2-201ENST00000609909 2850 ntBASIC7.42□□□□□ -1.22
MRE11P49959 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
MRE11P49959 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 AC004014.2-201ENST00000623718 5122 ntBASIC7.42□□□□□ -1.22
MRE11P49959 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AL359715.1-201ENST00000404330 555 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AL157698.1-201ENST00000415190 1011 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.42□□□□□ -1.22
MRE11P49959 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 AL365220.1-201ENST00000432923 399 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AC128677.1-201ENST00000436016 442 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 AC097359.1-201ENST00000447946 463 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AL353718.1-201ENST00000451028 517 ntBASIC7.42□□□□□ -1.22
MRE11P49959 RPL23AP64-201ENST00000469465 435 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.42□□□□□ -1.22
MRE11P49959 AC097486.1-201ENST00000515331 210 ntBASIC7.42□□□□□ -1.22
MRE11P49959 RNU4-18P-201ENST00000516751 149 ntBASIC7.42□□□□□ -1.22
MRE11P49959 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.42□□□□□ -1.22
MRE11P49959 AC136777.2-201ENST00000522979 358 ntBASIC7.42□□□□□ -1.22
MRE11P49959 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.42□□□□□ -1.22
MRE11P49959 LINC00557-201ENST00000563184 1279 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC7.42□□□□□ -1.22
MRE11P49959 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.42□□□□□ -1.22
MRE11P49959 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 RN7SL270P-201ENST00000579643 281 ntBASIC7.42□□□□□ -1.22
MRE11P49959 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.42□□□□□ -1.22
MRE11P49959 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 AC135803.1-201ENST00000608748 565 ntBASIC7.42□□□□□ -1.22
MRE11P49959 AL137000.1-201ENST00000610528 1244 ntBASIC7.42□□□□□ -1.22
MRE11P49959 RN7SL126P-201ENST00000616400 299 ntBASIC7.42□□□□□ -1.22
MRE11P49959 RNA5SP439-201ENST00000617595 124 ntBASIC7.42□□□□□ -1.22
MRE11P49959 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.42□□□□□ -1.22
MRE11P49959 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 AC092451.3-201ENST00000625067 1343 ntBASIC7.42□□□□□ -1.22
MRE11P49959 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
MRE11P49959 OR51C1P-202ENST00000641159 1444 ntBASIC7.42□□□□□ -1.22
MRE11P49959 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.42□□□□□ -1.22
MRE11P49959 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
MRE11P49959 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.41□□□□□ -1.22
MRE11P49959 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.41□□□□□ -1.22
MRE11P49959 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.41□□□□□ -1.22
MRE11P49959 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MRE11P49959 RN7SKP69-201ENST00000365390 305 ntBASIC7.41□□□□□ -1.22
MRE11P49959 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.41□□□□□ -1.22
MRE11P49959 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
MRE11P49959 GCNT1P4-201ENST00000404096 329 ntBASIC7.41□□□□□ -1.22
MRE11P49959 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms