Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SOX2P48431 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SOX2P48431 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.57□□□□□ -1.52
SOX2P48431 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 RNU4-27P-201ENST00000410889 139 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC007562.1-201ENST00000421819 517 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC245884.2-201ENST00000426257 404 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.57□□□□□ -1.52
SOX2P48431 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 AC079922.1-201ENST00000443291 359 ntBASIC5.57□□□□□ -1.52
SOX2P48431 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 AC023274.2-201ENST00000445264 521 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 AL627224.1-201ENST00000448334 444 ntBASIC5.57□□□□□ -1.52
SOX2P48431 PCMTD1P3-201ENST00000451824 472 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 AC063955.1-201ENST00000462872 685 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.57□□□□□ -1.52
SOX2P48431 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 AC104982.1-201ENST00000478775 574 ntBASIC5.57□□□□□ -1.52
SOX2P48431 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.57□□□□□ -1.52
SOX2P48431 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 AC131392.1-201ENST00000506490 633 ntBASIC5.57□□□□□ -1.52
SOX2P48431 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SOX2P48431 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 RN7SKP242-201ENST00000515967 289 ntBASIC5.57□□□□□ -1.52
SOX2P48431 SCARNA5-201ENST00000516201 276 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.57□□□□□ -1.52
SOX2P48431 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.57□□□□□ -1.52
SOX2P48431 AC009120.3-201ENST00000563335 499 ntBASIC5.57□□□□□ -1.52
SOX2P48431 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 PPIAP14-201ENST00000577627 496 ntBASIC5.57□□□□□ -1.52
SOX2P48431 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 AC245052.7-201ENST00000601161 359 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 AL583832.1-201ENST00000603227 784 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AL512413.1-201ENST00000606489 382 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AL008723.3-201ENST00000608926 449 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AL133370.2-201ENST00000619934 439 ntBASIC5.57□□□□□ -1.52
SOX2P48431 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SOX2P48431 AL162377.2-201ENST00000624532 337 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC093909.6-201ENST00000624757 775 ntBASIC5.57□□□□□ -1.52
SOX2P48431 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 OR5AC4P-202ENST00000642086 985 ntBASIC5.57□□□□□ -1.52
SOX2P48431 AC095038.1-201ENST00000429248 1591 ntBASIC5.57□□□□□ -1.52
SOX2P48431 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 TTC41P-205ENST00000551270 3963 ntBASIC5.57□□□□□ -1.52
SOX2P48431 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
SOX2P48431 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
SOX2P48431 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SOX2P48431 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 QRSL1P3-201ENST00000552666 1316 ntBASIC5.56□□□□□ -1.52
SOX2P48431 RPL31P11-201ENST00000426558 1558 ntBASIC5.56□□□□□ -1.52
SOX2P48431 FUNDC2P3-201ENST00000334716 533 ntBASIC5.56□□□□□ -1.52
SOX2P48431 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SOX2P48431 RNU6-1251P-201ENST00000364502 107 ntBASIC5.56□□□□□ -1.52
SOX2P48431 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 RANP6-201ENST00000413691 644 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC017078.1-201ENST00000416146 368 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.56□□□□□ -1.52
SOX2P48431 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.56□□□□□ -1.52
SOX2P48431 GLUD1P9-201ENST00000420997 1173 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 MTCO2P23-201ENST00000425216 680 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 AC009362.1-201ENST00000427253 406 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms