Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.34□□□□□ -1.39
PTPN9P43378 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PTPN9P43378 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PTPN9P43378 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
PTPN9P43378 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 RNA5SP279-201ENST00000365513 117 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 USP9YP19-201ENST00000412165 485 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.34□□□□□ -1.39
PTPN9P43378 RPL12P12-201ENST00000424633 501 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.34□□□□□ -1.39
PTPN9P43378 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.34□□□□□ -1.39
PTPN9P43378 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.34□□□□□ -1.39
PTPN9P43378 TRIM60P16-201ENST00000444048 694 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 ZNF619P1-201ENST00000446539 752 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.34□□□□□ -1.39
PTPN9P43378 SEPT7P6-201ENST00000469999 1143 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 EIF4E2P2-201ENST00000492033 736 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.34□□□□□ -1.39
PTPN9P43378 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.34□□□□□ -1.39
PTPN9P43378 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.34□□□□□ -1.39
PTPN9P43378 RN7SKP5-201ENST00000517045 272 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.34□□□□□ -1.39
PTPN9P43378 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.34□□□□□ -1.39
PTPN9P43378 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.34□□□□□ -1.39
PTPN9P43378 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.34□□□□□ -1.39
PTPN9P43378 MIR132-201ENST00000591554 101 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 AL645933.2-201ENST00000606743 1207 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 AC117490.2-201ENST00000610042 594 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 RFPL4AP6-201ENST00000616792 846 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 FAM27E2-201ENST00000619668 403 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 AL139254.3-201ENST00000641097 674 ntBASIC6.34□□□□□ -1.39
PTPN9P43378 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.34□□□□□ -1.39
PTPN9P43378 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTPN9P43378 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PTPN9P43378 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.34□□□□□ -1.4
PTPN9P43378 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
PTPN9P43378 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.34□□□□□ -1.4
PTPN9P43378 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 RBMY1HP-201ENST00000382759 1389 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 IMMTP1-201ENST00000435590 2219 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC119674.1-202ENST00000641333 1860 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PTPN9P43378 Y_RNA.62-201ENST00000362840 99 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 RNU1-134P-201ENST00000362935 165 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.33□□□□□ -1.4
PTPN9P43378 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 RPL23AP17-201ENST00000401064 499 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AL132875.1-201ENST00000403623 949 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 SNORA77.2-201ENST00000408571 112 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.33□□□□□ -1.4
PTPN9P43378 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 Z85994.2-201ENST00000434327 452 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 CLNS1AP1-201ENST00000435954 682 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC023141.3-201ENST00000436698 278 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 FTLP8-201ENST00000446770 267 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC097463.1-201ENST00000447288 481 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 OR52I1-201ENST00000450052 1050 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AL162739.1-201ENST00000450606 307 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC016027.4-201ENST00000450866 277 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC090589.1-201ENST00000473109 362 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 AC112184.1-201ENST00000505179 312 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.33□□□□□ -1.4
PTPN9P43378 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 RNU6-467P-201ENST00000517027 110 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 RN7SKP183-201ENST00000517169 324 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC026688.1-201ENST00000520639 1168 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 AL049779.3-201ENST00000557141 606 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AL731537.2-201ENST00000561565 951 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC093524.1-201ENST00000564266 1094 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.33□□□□□ -1.4
PTPN9P43378 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.33□□□□□ -1.4
PTPN9P43378 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms