Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 RPL17P17-201ENST00000419491 557 ntBASIC6.07□□□□□ -1.44
CD40P25942 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 AC005345.1-201ENST00000431868 217 ntBASIC6.07□□□□□ -1.44
CD40P25942 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AC090018.1-201ENST00000434369 367 ntBASIC6.07□□□□□ -1.44
CD40P25942 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AL359265.1-201ENST00000440296 795 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC002542.1-201ENST00000440683 193 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AL354714.5-201ENST00000450131 590 ntBASIC6.07□□□□□ -1.44
CD40P25942 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 RPS27AP2-201ENST00000457576 465 ntBASIC6.07□□□□□ -1.44
CD40P25942 TPTE2P5-203ENST00000458118 728 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 PSAT1P4-201ENST00000466500 526 ntBASIC6.07□□□□□ -1.44
CD40P25942 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AC084024.2-201ENST00000503480 791 ntBASIC6.07□□□□□ -1.44
CD40P25942 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AC083923.1-201ENST00000523708 376 ntBASIC6.07□□□□□ -1.44
CD40P25942 IGLVV-66-201ENST00000523818 341 ntBASIC6.07□□□□□ -1.44
CD40P25942 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 PDCL2P2-201ENST00000533651 189 ntBASIC6.07□□□□□ -1.44
CD40P25942 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.07□□□□□ -1.44
CD40P25942 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 HMGN1P26-201ENST00000558737 303 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 MIR5708-201ENST00000579723 85 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.07□□□□□ -1.44
CD40P25942 AP002884.5-201ENST00000595053 1132 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 MRPS35P3-201ENST00000603189 709 ntBASIC6.07□□□□□ -1.44
CD40P25942 AL392048.1-201ENST00000613946 534 ntBASIC6.07□□□□□ -1.44
CD40P25942 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 AC004836.1-201ENST00000623032 634 ntBASIC6.07□□□□□ -1.44
CD40P25942 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.07□□□□□ -1.44
CD40P25942 AC135068.11-201ENST00000636378 921 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC007671.2-201ENST00000637344 619 ntBASIC6.07□□□□□ -1.44
CD40P25942 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 TPTE2P2-201ENST00000403471 1466 ntBASIC6.07□□□□□ -1.44
CD40P25942 AC006042.3-201ENST00000454684 1469 ntBASIC6.07□□□□□ -1.44
CD40P25942 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CD40P25942 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CD40P25942 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.07□□□□□ -1.44
CD40P25942 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 AC000367.1-201ENST00000452711 1766 ntBASIC6.06□□□□□ -1.44
CD40P25942 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 AC053481.2-202ENST00000582394 1500 ntBASIC6.06□□□□□ -1.44
CD40P25942 AL021877.2-201ENST00000624442 10684 ntBASIC6.06□□□□□ -1.44
CD40P25942 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 AF131215.2-201ENST00000531549 1710 ntBASIC6.06□□□□□ -1.44
CD40P25942 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CD40P25942 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CD40P25942 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.06□□□□□ -1.44
CD40P25942 AL079342.2-201ENST00000403367 482 ntBASIC6.06□□□□□ -1.44
CD40P25942 RN7SKP148-201ENST00000410179 275 ntBASIC6.06□□□□□ -1.44
CD40P25942 TCEA1P4-201ENST00000415066 844 ntBASIC6.06□□□□□ -1.44
CD40P25942 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 QRSL1P2-201ENST00000418582 964 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC027644.1-201ENST00000419595 298 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms