Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 AC011477.1-204ENST00000623416 1325 ntBASIC8.12□□□□□ -1.11
RFX1P22670 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 AL137100.1-201ENST00000556703 1620 ntBASIC8.12□□□□□ -1.11
RFX1P22670 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RFX1P22670 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 RNU6-666P-201ENST00000363499 107 ntBASIC8.12□□□□□ -1.11
RFX1P22670 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 RNU6-575P-201ENST00000411326 105 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AL663109.1-201ENST00000411498 844 ntBASIC8.12□□□□□ -1.11
RFX1P22670 NRBF2P2-201ENST00000413087 861 ntBASIC8.12□□□□□ -1.11
RFX1P22670 PPIAP30-201ENST00000415473 519 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC017078.1-201ENST00000416146 368 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 AL022400.1-201ENST00000423946 935 ntBASIC8.12□□□□□ -1.11
RFX1P22670 SNX18P14-201ENST00000429308 574 ntBASIC8.12□□□□□ -1.11
RFX1P22670 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.12□□□□□ -1.11
RFX1P22670 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.12□□□□□ -1.11
RFX1P22670 NIP7P1-201ENST00000433227 512 ntBASIC8.12□□□□□ -1.11
RFX1P22670 RPSAP40-201ENST00000442343 891 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 AL020997.1-201ENST00000446554 349 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.12□□□□□ -1.11
RFX1P22670 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 AC019084.1-201ENST00000457337 432 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC037198.2-201ENST00000478845 733 ntBASIC8.12□□□□□ -1.11
RFX1P22670 RPL7P40-201ENST00000481703 745 ntBASIC8.12□□□□□ -1.11
RFX1P22670 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 RN7SL776P-201ENST00000493390 268 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC122714.1-201ENST00000502510 459 ntBASIC8.12□□□□□ -1.11
RFX1P22670 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
RFX1P22670 CCDC11P1-201ENST00000503137 1162 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.12□□□□□ -1.11
RFX1P22670 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 AC010460.1-201ENST00000507087 466 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 AC084337.1-201ENST00000524809 686 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 AP002963.1-201ENST00000530590 184 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AP000873.5-201ENST00000533906 236 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.12□□□□□ -1.11
RFX1P22670 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 OR7E94P-202ENST00000601375 790 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC024451.4-201ENST00000602578 752 ntBASIC8.12□□□□□ -1.11
RFX1P22670 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 RN7SL680P-201ENST00000620379 299 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC008443.7-201ENST00000622195 246 ntBASIC8.12□□□□□ -1.11
RFX1P22670 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.12□□□□□ -1.11
RFX1P22670 AC129908.1-201ENST00000624553 648 ntBASIC8.12□□□□□ -1.11
RFX1P22670 U6.107-201ENST00000637108 79 ntBASIC8.12□□□□□ -1.11
RFX1P22670 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
RFX1P22670 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.12□□□□□ -1.11
RFX1P22670 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.12□□□□□ -1.11
RFX1P22670 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RFX1P22670 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RFX1P22670 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.11□□□□□ -1.11
RFX1P22670 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RFX1P22670 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RFX1P22670 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms