Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 UGT2B24P-201ENST00000514441 1597 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NFKB1P19838 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NFKB1P19838 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 Y_RNA.61-201ENST00000362835 102 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 RN7SKP211-201ENST00000363328 315 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC113608.1-201ENST00000398740 305 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 NUP35P2-201ENST00000416748 943 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AL593856.1-201ENST00000419949 805 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AL109913.1-201ENST00000421173 514 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 USP9YP18-201ENST00000425912 695 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC093155.1-201ENST00000440164 826 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 TRIM60P18-201ENST00000441518 828 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC026336.1-201ENST00000466577 351 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 RN7SL58P-201ENST00000473445 294 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 NCOR1P1-202ENST00000486162 291 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.51□□□□□ -1.21
NFKB1P19838 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 HSPE1P23-201ENST00000509838 286 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC117383.2-201ENST00000514722 322 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 snoZ278.1-201ENST00000517059 112 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 OR5F2P-201ENST00000532761 941 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 CENPUP2-201ENST00000555897 1186 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC103968.1-201ENST00000557841 573 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC044860.3-201ENST00000559957 368 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC010547.7-201ENST00000570323 333 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.51□□□□□ -1.21
NFKB1P19838 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 AL159169.3-201ENST00000608871 561 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.51□□□□□ -1.21
NFKB1P19838 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC073869.7-201ENST00000640874 297 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 AC006116.1-201ENST00000587908 2171 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 AC125603.4-201ENST00000621942 2699 ntBASIC7.51□□□□□ -1.21
NFKB1P19838 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NFKB1P19838 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.51□□□□□ -1.21
NFKB1P19838 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NFKB1P19838 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NFKB1P19838 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.5□□□□□ -1.21
NFKB1P19838 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.5□□□□□ -1.21
NFKB1P19838 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
NFKB1P19838 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NFKB1P19838 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.5□□□□□ -1.21
NFKB1P19838 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NFKB1P19838 WASF5P-205ENST00000428639 1455 ntBASIC7.5□□□□□ -1.21
NFKB1P19838 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.5□□□□□ -1.21
NFKB1P19838 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.5□□□□□ -1.21
NFKB1P19838 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NFKB1P19838 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.5□□□□□ -1.21
NFKB1P19838 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NFKB1P19838 RNA5SP301-201ENST00000362537 121 ntBASIC7.5□□□□□ -1.21
NFKB1P19838 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC7.5□□□□□ -1.21
NFKB1P19838 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.5□□□□□ -1.21
NFKB1P19838 RPL24P7-201ENST00000399435 453 ntBASIC7.5□□□□□ -1.21
NFKB1P19838 AL356968.2-201ENST00000412769 1257 ntBASIC7.5□□□□□ -1.21
NFKB1P19838 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.5□□□□□ -1.21
NFKB1P19838 AC009237.9-201ENST00000414800 347 ntBASIC7.5□□□□□ -1.21
NFKB1P19838 TAF13P2-201ENST00000416876 286 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms