Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CTLA4P16410 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 AC060780.2-201ENST00000589047 198 ntBASIC5.21□□□□□ -1.58
CTLA4P16410 AL133481.2-203ENST00000607558 139 ntBASIC5.21□□□□□ -1.58
CTLA4P16410 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.21□□□□□ -1.58
CTLA4P16410 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.21□□□□□ -1.58
CTLA4P16410 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.21□□□□□ -1.58
CTLA4P16410 AC000095.2-202ENST00000637415 154 ntBASIC5.21□□□□□ -1.58
CTLA4P16410 OR11H2-202ENST00000641517 1085 ntBASIC5.21□□□□□ -1.58
CTLA4P16410 AC119674.1-217ENST00000641942 1086 ntBASIC5.21□□□□□ -1.58
CTLA4P16410 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.21□□□□□ -1.58
CTLA4P16410 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CTLA4P16410 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.21□□□□□ -1.58
CTLA4P16410 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CTLA4P16410 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CTLA4P16410 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CTLA4P16410 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.21□□□□□ -1.58
CTLA4P16410 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 MSL3P1-202ENST00000440028 1468 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.2□□□□□ -1.58
CTLA4P16410 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.2□□□□□ -1.58
CTLA4P16410 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTLA4P16410 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTLA4P16410 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 U3.10-201ENST00000364459 214 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 RN7SKP78-201ENST00000364711 318 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.2□□□□□ -1.58
CTLA4P16410 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.2□□□□□ -1.58
CTLA4P16410 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.2□□□□□ -1.58
CTLA4P16410 PNKDP1-201ENST00000435914 430 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.2□□□□□ -1.58
CTLA4P16410 RBMY2AP-201ENST00000445405 1157 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 RBMY2CP-201ENST00000448575 1157 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 RBMY2DP-202ENST00000448881 1157 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 RBMY2BP-202ENST00000451071 1156 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC090058.1-201ENST00000498788 435 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 RN7SKP238-201ENST00000516483 249 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.2□□□□□ -1.58
CTLA4P16410 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.2□□□□□ -1.58
CTLA4P16410 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.2□□□□□ -1.58
CTLA4P16410 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.2□□□□□ -1.58
CTLA4P16410 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTLA4P16410 MIR4420-201ENST00000583944 77 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 AL513327.3-201ENST00000602618 469 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC145423.1-201ENST00000605712 336 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC092266.1-201ENST00000610958 165 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 MIR6809-201ENST00000612189 116 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 MFSD8-219ENST00000641228 2559 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 AC015799.1-201ENST00000622996 3122 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 MFSD8-239ENST00000641590 2479 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CTLA4P16410 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 PARP4P2-201ENST00000446672 3326 ntBASIC5.2□□□□□ -1.58
CTLA4P16410 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTLA4P16410 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CTLA4P16410 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CTLA4P16410 AP004607.3-201ENST00000530354 3915 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CTLA4P16410 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
CTLA4P16410 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CTLA4P16410 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CTLA4P16410 PPBPP2-201ENST00000513150 1362 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 AC090181.3-201ENST00000624777 1514 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.19□□□□□ -1.58
CTLA4P16410 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CTLA4P16410 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CTLA4P16410 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CTLA4P16410 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CTLA4P16410 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTLA4P16410 RN7SKP17-201ENST00000411242 351 ntBASIC5.19□□□□□ -1.58
CTLA4P16410 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms