Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC130304.1-201ENST00000622942 2385 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 MIPEPP2-201ENST00000422560 1819 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 CR383656.5-201ENST00000547616 1340 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
MT-ND1P03886 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 AL157702.1-201ENST00000398764 426 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MT-ND1P03886 METTL15P3-201ENST00000415522 1221 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.58□□□□□ -1.52
MT-ND1P03886 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AL022324.2-201ENST00000434827 780 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 CXCR2P1-202ENST00000443392 1074 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.58□□□□□ -1.52
MT-ND1P03886 FRG2FP-204ENST00000453982 852 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 RARRES2P3-201ENST00000457739 473 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC108751.3-201ENST00000461814 1020 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 RN7SL104P-201ENST00000498686 293 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC105420.1-201ENST00000504389 582 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC097486.1-201ENST00000515331 210 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC078899.1-201ENST00000521432 1185 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 KCTD9P6-201ENST00000522306 950 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC090424.1-201ENST00000535243 736 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.58□□□□□ -1.52
MT-ND1P03886 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC010547.7-201ENST00000570323 333 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.58□□□□□ -1.52
MT-ND1P03886 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 RNU6-84P-201ENST00000607737 102 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 GAPDHP41-201ENST00000613707 975 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.58□□□□□ -1.52
MT-ND1P03886 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 AL355488.2-201ENST00000609909 2850 ntBASIC5.58□□□□□ -1.52
MT-ND1P03886 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MT-ND1P03886 NAMPTP1-201ENST00000440465 2514 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AC018628.1-201ENST00000624147 3819 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
MT-ND1P03886 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.57□□□□□ -1.52
MT-ND1P03886 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AL929601.4-201ENST00000613011 1341 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
MT-ND1P03886 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
MT-ND1P03886 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
MT-ND1P03886 YWHAZP4-201ENST00000392459 708 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.57□□□□□ -1.52
MT-ND1P03886 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MT-ND1P03886 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.57□□□□□ -1.52
MT-ND1P03886 BX276092.6-201ENST00000430476 250 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 GAPDHP75-201ENST00000433910 943 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC094019.1-201ENST00000434678 472 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC242426.1-201ENST00000435270 960 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 MTND2P40-201ENST00000436718 841 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 RPEP4-201ENST00000437636 602 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
MT-ND1P03886 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.57□□□□□ -1.52
MT-ND1P03886 HIGD1AP16-201ENST00000450986 258 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 BX276092.8-201ENST00000455722 250 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC079080.1-201ENST00000479841 822 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 RPL38P3-201ENST00000484463 213 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 EIF4E2P2-201ENST00000492033 736 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.57□□□□□ -1.52
MT-ND1P03886 SUMO2P4-201ENST00000504193 276 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 OR8Q1P-201ENST00000526467 655 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AC090826.1-203ENST00000569235 490 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AC022400.9-201ENST00000623633 273 ntBASIC5.57□□□□□ -1.52
MT-ND1P03886 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.57□□□□□ -1.52
MT-ND1P03886 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms