Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 CR848007.2-201ENST00000424918 787 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL590623.1-201ENST00000427864 105 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC112492.2-201ENST00000432774 1030 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ZFAND6P1-201ENST00000434138 605 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC135626.1-201ENST00000556983 435 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 MIR4701-201ENST00000583094 63 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC090616.1-201ENST00000583895 447 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC017076.1-201ENST00000607613 578 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC092266.1-201ENST00000610958 165 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL080312.2-201ENST00000613001 630 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL352984.2-202ENST00000613699 155 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AP001885.1-201ENST00000621658 558 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC020763.5-201ENST00000623298 430 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AP000550.3-201ENST00000637734 379 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 OR51C1P-202ENST00000641159 1444 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC027575.3-201ENST00000583058 2747 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AL049634.1-201ENST00000453770 1720 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 MTCO1P28-201ENST00000574177 1528 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 AC062022.1-201ENST00000451026 1684 ntBASIC6.81□□□□□ -1.32
SSX2IPQ9Y2D8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 SNORA70H-201ENST00000383910 135 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 SNORA70J-201ENST00000384182 135 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 CYCSP52-201ENST00000422857 310 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 PPIAP27-201ENST00000453800 265 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 RN7SL326P-201ENST00000477493 296 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 RN7SL714P-201ENST00000487050 298 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC091965.3-201ENST00000506236 208 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 OR4D12P-201ENST00000509361 911 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 RNA5SP206-201ENST00000516703 121 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC021733.2-201ENST00000518830 497 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC084337.1-201ENST00000524809 686 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 OR4A13P-201ENST00000529316 942 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC090826.1-203ENST00000569235 490 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 RN7SL753P-201ENST00000581238 290 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 GLYATL1P2-202ENST00000588046 902 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AL139022.2-201ENST00000606934 443 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC010998.3-201ENST00000613871 631 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AL445647.2-201ENST00000615170 130 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC018659.2-201ENST00000624690 715 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC022919.1-201ENST00000624979 626 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 AP004289.1-201ENST00000436307 2205 ntBASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SSX2IPQ9Y2D8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms