Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 MTCO2P19-201ENST00000427513 598 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC073900.1-201ENST00000429766 776 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL021939.1-201ENST00000441868 886 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL512326.1-201ENST00000443050 721 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC104763.1-201ENST00000475274 360 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 RPL9P33-201ENST00000484311 566 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 RN7SL124P-201ENST00000498656 285 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 NMNAT1P4-201ENST00000505598 840 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 CBX3P3-201ENST00000508108 532 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC114940.1-201ENST00000512162 1265 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 NMNAT1P5-201ENST00000559657 841 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC116651.1-201ENST00000609724 556 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC138749.5-201ENST00000611461 208 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC015660.5-201ENST00000623238 564 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AC009831.5-201ENST00000624000 3189 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSU72Q9NP77 AL359694.2-201ENST00000567753 1615 ntBASIC7.05□□□□□ -1.28
SSU72Q9NP77 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SSU72Q9NP77 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC019072.1-201ENST00000604535 1551 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 MT-TH-201ENST00000387441 69 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 OR8G2P-201ENST00000412796 908 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL354941.1-201ENST00000438600 464 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC092641.1-201ENST00000440229 772 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL020997.1-201ENST00000446554 349 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 RPS29P5-201ENST00000452777 171 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 RN7SL571P-201ENST00000468302 295 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 SETP11-201ENST00000473027 690 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 RPL12P5-201ENST00000475149 392 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL024509.2-201ENST00000493462 493 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 RPS6P4-201ENST00000494693 758 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC006070.1-201ENST00000508151 193 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC091965.2-201ENST00000512324 613 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC064807.3-201ENST00000523810 470 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL139174.1-201ENST00000531489 886 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 OR8G3P-201ENST00000533406 921 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 MTCO3P24-201ENST00000572729 782 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 RN7SL667P-201ENST00000582817 298 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 MIR4664-201ENST00000583819 71 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms