Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AP000473.2-201ENST00000602659 1537 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 OR5J1P-201ENST00000313544 939 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC005294.1-201ENST00000355509 281 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Y_RNA.25-201ENST00000362528 102 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Y_RNA.381-201ENST00000365666 102 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 RPL7P58-201ENST00000402913 758 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 VN1R8P-201ENST00000407739 893 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Y_RNA.605-201ENST00000410577 105 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 MTND3P8-201ENST00000412909 339 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 RPL12P27-201ENST00000414870 496 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 MRPL50P2-201ENST00000416821 482 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 ELOCP4-201ENST00000420090 333 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL589872.1-201ENST00000426602 288 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Z82205.1-201ENST00000428456 297 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 Z98949.2-201ENST00000440996 144 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 NDUFB11P1-201ENST00000455818 465 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL031727.1-201ENST00000457263 455 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC087501.2-201ENST00000466869 581 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC084017.1-201ENST00000483240 860 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC079594.1-201ENST00000489757 331 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 RPL17P2-201ENST00000491913 451 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC111193.1-201ENST00000504097 155 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC026782.1-201ENST00000512952 449 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC112206.3-201ENST00000514578 389 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 RNU6-583P-201ENST00000516012 92 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC107953.1-201ENST00000522216 297 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 OR5D2P-201ENST00000524390 911 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC136443.2-201ENST00000528546 258 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC023050.3-201ENST00000541142 333 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC136619.1-201ENST00000564015 258 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 MIR4503-201ENST00000582187 83 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 MIR544B-201ENST00000582372 78 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL589863.1-201ENST00000595383 631 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL133351.4-201ENST00000604204 631 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 AC104237.2-201ENST00000612456 443 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 RN7SL575P-201ENST00000620774 299 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 CASC19-212ENST00000641153 1287 ntBASIC7.75□□□□□ -1.17
USB1Q9BQ65 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USB1Q9BQ65 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.75□□□□□ -1.17
USB1Q9BQ65 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 LINC00561-201ENST00000565815 2738 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 XRCC6P5-201ENST00000435236 1795 ntBASIC7.74□□□□□ -1.17
USB1Q9BQ65 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USB1Q9BQ65 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
USB1Q9BQ65 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms