Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.34□□□□□ -1.55
SSX3Q99909 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 AL049874.4-201ENST00000557593 255 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC092718.4-201ENST00000566639 716 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX3Q99909 AC004232.1-201ENST00000571388 208 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC097467.4-201ENST00000605504 141 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 SNORD96A-201ENST00000606577 79 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 MIR6780B-201ENST00000610307 79 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 MIR6823-201ENST00000622118 61 ntBASIC5.34□□□□□ -1.55
SSX3Q99909 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX3Q99909 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX3Q99909 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SSX3Q99909 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.34□□□□□ -1.56
SSX3Q99909 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
SSX3Q99909 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX3Q99909 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.34□□□□□ -1.56
SSX3Q99909 AL031595.2-201ENST00000624215 19071 ntBASIC5.34□□□□□ -1.56
SSX3Q99909 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.34□□□□□ -1.56
SSX3Q99909 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX3Q99909 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SSX3Q99909 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SSX3Q99909 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
SSX3Q99909 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SSX3Q99909 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 OR9K1P-202ENST00000641111 3217 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 TCP11X1-202ENST00000622971 1372 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 PSMC1P6-201ENST00000477233 1319 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSX3Q99909 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSX3Q99909 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSX3Q99909 VIM2P-201ENST00000402383 1294 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC099535.1-201ENST00000408928 371 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AL139184.1-202ENST00000422303 222 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 NPM1P19-201ENST00000450070 712 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX3Q99909 AC007386.1-201ENST00000455212 582 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC093870.1-201ENST00000506837 213 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC106800.3-201ENST00000511389 308 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC093664.1-201ENST00000511779 289 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 RNU6-751P-201ENST00000516382 101 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX3Q99909 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 AP001000.1-201ENST00000526843 742 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AP003033.2-201ENST00000528901 805 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 OR4A42P-201ENST00000531397 938 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX3Q99909 AC025283.1-201ENST00000572039 734 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 SYPL1P2-201ENST00000582878 727 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC011500.1-201ENST00000601963 469 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC012368.3-201ENST00000604190 219 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AC009779.8-202ENST00000607990 932 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AL589743.6-201ENST00000611025 117 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 AP000577.1-201ENST00000624366 878 ntBASIC5.33□□□□□ -1.56
SSX3Q99909 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms